Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tff3Q62395 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tff3Q62395 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tff3Q62395 Gm45364-201ENSMUST00000210883 159 ntBASIC20.25■□□□□ 0.83
Tff3Q62395 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tff3Q62395 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tff3Q62395 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tff3Q62395 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tff3Q62395 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tff3Q62395 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tff3Q62395 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tff3Q62395 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tff3Q62395 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tff3Q62395 Gm9806-201ENSMUST00000051080 552 ntBASIC20.22■□□□□ 0.83
Tff3Q62395 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tff3Q62395 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tff3Q62395 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
Tff3Q62395 Gm11687-201ENSMUST00000118911 886 ntBASIC20.21■□□□□ 0.83
Tff3Q62395 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tff3Q62395 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tff3Q62395 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.21■□□□□ 0.83
Tff3Q62395 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tff3Q62395 Gm16437-201ENSMUST00000025669 507 ntBASIC20.2■□□□□ 0.82
Tff3Q62395 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tff3Q62395 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tff3Q62395 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.19■□□□□ 0.82
Tff3Q62395 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tff3Q62395 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tff3Q62395 Cap2-205ENSMUST00000225824 1634 ntBASIC20.18■□□□□ 0.82
Tff3Q62395 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tff3Q62395 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.18■□□□□ 0.82
Tff3Q62395 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.18■□□□□ 0.82
Tff3Q62395 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.17■□□□□ 0.82
Tff3Q62395 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tff3Q62395 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.16■□□□□ 0.82
Tff3Q62395 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tff3Q62395 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.16■□□□□ 0.82
Tff3Q62395 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.16■□□□□ 0.82
Tff3Q62395 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.16■□□□□ 0.82
Tff3Q62395 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tff3Q62395 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tff3Q62395 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.15■□□□□ 0.82
Tff3Q62395 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tff3Q62395 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tff3Q62395 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tff3Q62395 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tff3Q62395 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tff3Q62395 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tff3Q62395 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tff3Q62395 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tff3Q62395 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tff3Q62395 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tff3Q62395 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.12■□□□□ 0.81
Tff3Q62395 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tff3Q62395 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.11■□□□□ 0.81
Tff3Q62395 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tff3Q62395 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.1■□□□□ 0.81
Tff3Q62395 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Tff3Q62395 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tff3Q62395 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.09■□□□□ 0.81
Tff3Q62395 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tff3Q62395 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.09■□□□□ 0.81
Tff3Q62395 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tff3Q62395 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tff3Q62395 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tff3Q62395 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tff3Q62395 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.08■□□□□ 0.81
Tff3Q62395 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tff3Q62395 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tff3Q62395 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tff3Q62395 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.07■□□□□ 0.8
Tff3Q62395 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tff3Q62395 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tff3Q62395 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tff3Q62395 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tff3Q62395 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tff3Q62395 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.04■□□□□ 0.8
Tff3Q62395 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tff3Q62395 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.04■□□□□ 0.8
Tff3Q62395 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tff3Q62395 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.03■□□□□ 0.8
Tff3Q62395 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.03■□□□□ 0.8
Tff3Q62395 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.02■□□□□ 0.8
Tff3Q62395 Gm27502-201ENSMUST00000183495 199 ntBASIC20.02■□□□□ 0.8
Tff3Q62395 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.02■□□□□ 0.8
Tff3Q62395 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tff3Q62395 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.02■□□□□ 0.8
Tff3Q62395 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tff3Q62395 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tff3Q62395 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tff3Q62395 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.01■□□□□ 0.79
Tff3Q62395 Gm9910-201ENSMUST00000195385 1550 ntBASIC20■□□□□ 0.79
Tff3Q62395 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tff3Q62395 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20■□□□□ 0.79
Tff3Q62395 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tff3Q62395 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.99■□□□□ 0.79
Tff3Q62395 Gm9812-201ENSMUST00000061934 968 ntBASIC19.99■□□□□ 0.79
Tff3Q62395 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tff3Q62395 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tff3Q62395 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms