Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox19Q62249 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox19Q62249 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox19Q62249 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sox19Q62249 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sox19Q62249 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox19Q62249 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sox19Q62249 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sox19Q62249 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sox19Q62249 Gm24804-201ENSMUST00000174982 85 ntBASIC19.78■□□□□ 0.76
Sox19Q62249 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox19Q62249 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sox19Q62249 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sox19Q62249 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sox19Q62249 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sox19Q62249 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sox19Q62249 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox19Q62249 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sox19Q62249 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox19Q62249 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox19Q62249 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox19Q62249 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Sox19Q62249 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox19Q62249 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox19Q62249 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sox19Q62249 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox19Q62249 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox19Q62249 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox19Q62249 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Sox19Q62249 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.72■□□□□ 0.75
Sox19Q62249 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox19Q62249 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sox19Q62249 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Sox19Q62249 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sox19Q62249 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox19Q62249 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sox19Q62249 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.71■□□□□ 0.75
Sox19Q62249 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox19Q62249 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox19Q62249 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox19Q62249 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sox19Q62249 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sox19Q62249 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox19Q62249 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Sox19Q62249 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox19Q62249 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox19Q62249 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox19Q62249 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox19Q62249 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox19Q62249 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sox19Q62249 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox19Q62249 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sox19Q62249 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox19Q62249 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox19Q62249 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sox19Q62249 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox19Q62249 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sox19Q62249 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Sox19Q62249 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.65■□□□□ 0.74
Sox19Q62249 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sox19Q62249 Particl-201ENSMUST00000205370 1560 ntBASIC19.65■□□□□ 0.74
Sox19Q62249 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Sox19Q62249 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sox19Q62249 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.64■□□□□ 0.73
Sox19Q62249 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.64■□□□□ 0.73
Sox19Q62249 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox19Q62249 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.64■□□□□ 0.73
Sox19Q62249 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sox19Q62249 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sox19Q62249 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox19Q62249 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox19Q62249 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox19Q62249 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox19Q62249 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox19Q62249 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sox19Q62249 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox19Q62249 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sox19Q62249 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sox19Q62249 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox19Q62249 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sox19Q62249 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox19Q62249 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox19Q62249 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.6■□□□□ 0.73
Sox19Q62249 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox19Q62249 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox19Q62249 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox19Q62249 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox19Q62249 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox19Q62249 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox19Q62249 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.58■□□□□ 0.72
Sox19Q62249 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.58■□□□□ 0.72
Sox19Q62249 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.58■□□□□ 0.72
Sox19Q62249 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox19Q62249 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox19Q62249 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Sox19Q62249 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox19Q62249 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Sox19Q62249 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox19Q62249 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox19Q62249 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 186.9 ms