Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Foxc1Q61572 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxc1Q61572 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.83■□□□□ 0.29
Foxc1Q61572 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Foxc1Q61572 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxc1Q61572 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Foxc1Q61572 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxc1Q61572 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxc1Q61572 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Foxc1Q61572 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxc1Q61572 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Foxc1Q61572 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxc1Q61572 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxc1Q61572 Particl-201ENSMUST00000205370 1560 ntBASIC16.81■□□□□ 0.28
Foxc1Q61572 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.81■□□□□ 0.28
Foxc1Q61572 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxc1Q61572 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.81■□□□□ 0.28
Foxc1Q61572 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Foxc1Q61572 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxc1Q61572 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.79■□□□□ 0.28
Foxc1Q61572 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
Foxc1Q61572 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxc1Q61572 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxc1Q61572 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxc1Q61572 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.78■□□□□ 0.28
Foxc1Q61572 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Foxc1Q61572 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Foxc1Q61572 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Foxc1Q61572 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Foxc1Q61572 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.77■□□□□ 0.28
Foxc1Q61572 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.77■□□□□ 0.28
Foxc1Q61572 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxc1Q61572 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Foxc1Q61572 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Foxc1Q61572 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.76■□□□□ 0.27
Foxc1Q61572 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxc1Q61572 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxc1Q61572 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxc1Q61572 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxc1Q61572 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Foxc1Q61572 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxc1Q61572 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxc1Q61572 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxc1Q61572 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.74■□□□□ 0.27
Foxc1Q61572 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Foxc1Q61572 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxc1Q61572 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Foxc1Q61572 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.73■□□□□ 0.27
Foxc1Q61572 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxc1Q61572 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Foxc1Q61572 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.73■□□□□ 0.27
Foxc1Q61572 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxc1Q61572 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxc1Q61572 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxc1Q61572 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Foxc1Q61572 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Foxc1Q61572 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Foxc1Q61572 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Foxc1Q61572 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxc1Q61572 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.7■□□□□ 0.26
Foxc1Q61572 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Foxc1Q61572 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxc1Q61572 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Foxc1Q61572 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxc1Q61572 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Foxc1Q61572 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Foxc1Q61572 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Foxc1Q61572 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Foxc1Q61572 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Foxc1Q61572 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxc1Q61572 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxc1Q61572 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.67■□□□□ 0.26
Foxc1Q61572 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxc1Q61572 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxc1Q61572 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.66■□□□□ 0.26
Foxc1Q61572 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxc1Q61572 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxc1Q61572 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxc1Q61572 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.65■□□□□ 0.26
Foxc1Q61572 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Foxc1Q61572 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.64■□□□□ 0.25
Foxc1Q61572 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxc1Q61572 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Foxc1Q61572 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Foxc1Q61572 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Foxc1Q61572 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Foxc1Q61572 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Foxc1Q61572 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Foxc1Q61572 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Foxc1Q61572 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxc1Q61572 Mir6538-201ENSMUST00000183713 110 ntBASIC16.62■□□□□ 0.25
Foxc1Q61572 Gm6311-201ENSMUST00000073790 878 ntBASIC16.62■□□□□ 0.25
Foxc1Q61572 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Foxc1Q61572 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.62■□□□□ 0.25
Foxc1Q61572 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.61■□□□□ 0.25
Foxc1Q61572 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Foxc1Q61572 Gm37136-201ENSMUST00000194368 194 ntBASIC16.61■□□□□ 0.25
Foxc1Q61572 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Foxc1Q61572 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Foxc1Q61572 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 108.3 ms