Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hcfc1Q61191 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Hcfc1Q61191 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hcfc1Q61191 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.21■□□□□ 0.83
Hcfc1Q61191 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hcfc1Q61191 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.2■□□□□ 0.83
Hcfc1Q61191 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Hcfc1Q61191 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hcfc1Q61191 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.2■□□□□ 0.82
Hcfc1Q61191 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcfc1Q61191 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcfc1Q61191 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hcfc1Q61191 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hcfc1Q61191 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hcfc1Q61191 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.19■□□□□ 0.82
Hcfc1Q61191 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.19■□□□□ 0.82
Hcfc1Q61191 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Hcfc1Q61191 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.19■□□□□ 0.82
Hcfc1Q61191 Gm14523-201ENSMUST00000117260 558 ntBASIC20.17■□□□□ 0.82
Hcfc1Q61191 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcfc1Q61191 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcfc1Q61191 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hcfc1Q61191 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Hcfc1Q61191 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Hcfc1Q61191 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hcfc1Q61191 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hcfc1Q61191 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hcfc1Q61191 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hcfc1Q61191 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hcfc1Q61191 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hcfc1Q61191 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.15■□□□□ 0.82
Hcfc1Q61191 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hcfc1Q61191 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hcfc1Q61191 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.14■□□□□ 0.81
Hcfc1Q61191 Gm10420-201ENSMUST00000121713 882 ntBASIC20.14■□□□□ 0.81
Hcfc1Q61191 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hcfc1Q61191 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hcfc1Q61191 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Hcfc1Q61191 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hcfc1Q61191 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hcfc1Q61191 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hcfc1Q61191 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.13■□□□□ 0.81
Hcfc1Q61191 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hcfc1Q61191 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hcfc1Q61191 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Hcfc1Q61191 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.12■□□□□ 0.81
Hcfc1Q61191 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcfc1Q61191 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcfc1Q61191 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.12■□□□□ 0.81
Hcfc1Q61191 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcfc1Q61191 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcfc1Q61191 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hcfc1Q61191 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hcfc1Q61191 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.09■□□□□ 0.81
Hcfc1Q61191 Gm5812-201ENSMUST00000061073 957 ntBASIC20.09■□□□□ 0.81
Hcfc1Q61191 Gm9812-201ENSMUST00000061934 968 ntBASIC20.09■□□□□ 0.81
Hcfc1Q61191 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcfc1Q61191 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hcfc1Q61191 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hcfc1Q61191 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hcfc1Q61191 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hcfc1Q61191 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Hcfc1Q61191 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.08■□□□□ 0.8
Hcfc1Q61191 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hcfc1Q61191 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hcfc1Q61191 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hcfc1Q61191 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcfc1Q61191 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcfc1Q61191 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcfc1Q61191 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hcfc1Q61191 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.06■□□□□ 0.8
Hcfc1Q61191 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.05■□□□□ 0.8
Hcfc1Q61191 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcfc1Q61191 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Hcfc1Q61191 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcfc1Q61191 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.05■□□□□ 0.8
Hcfc1Q61191 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hcfc1Q61191 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.04■□□□□ 0.8
Hcfc1Q61191 Gm5921-201ENSMUST00000075898 882 ntBASIC20.04■□□□□ 0.8
Hcfc1Q61191 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.03■□□□□ 0.8
Hcfc1Q61191 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.03■□□□□ 0.8
Hcfc1Q61191 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.03■□□□□ 0.8
Hcfc1Q61191 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcfc1Q61191 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcfc1Q61191 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hcfc1Q61191 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcfc1Q61191 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hcfc1Q61191 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hcfc1Q61191 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
Hcfc1Q61191 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hcfc1Q61191 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Hcfc1Q61191 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.01■□□□□ 0.79
Hcfc1Q61191 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hcfc1Q61191 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hcfc1Q61191 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hcfc1Q61191 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20■□□□□ 0.79
Hcfc1Q61191 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hcfc1Q61191 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hcfc1Q61191 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcfc1Q61191 Terc-201ENSMUST00000082862 423 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms