Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC35.15■■■■□ 3.22
Ptch1Q61115 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Ptch1Q61115 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Ptch1Q61115 Gm10420-201ENSMUST00000121713 882 ntBASIC35.15■■■■□ 3.22
Ptch1Q61115 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC35.14■■■■□ 3.22
Ptch1Q61115 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Ptch1Q61115 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC35.14■■■■□ 3.22
Ptch1Q61115 Gm9905-201ENSMUST00000065740 1845 ntBASIC35.14■■■■□ 3.22
Ptch1Q61115 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC35.13■■■■□ 3.21
Ptch1Q61115 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
Ptch1Q61115 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC35.13■■■■□ 3.21
Ptch1Q61115 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
Ptch1Q61115 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC35.12■■■■□ 3.21
Ptch1Q61115 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
Ptch1Q61115 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Ptch1Q61115 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC35.09■■■■□ 3.21
Ptch1Q61115 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC35.09■■■■□ 3.21
Ptch1Q61115 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC35.08■■■■□ 3.21
Ptch1Q61115 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC35.08■■■■□ 3.21
Ptch1Q61115 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
Ptch1Q61115 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC35.06■■■■□ 3.2
Ptch1Q61115 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC35.06■■■■□ 3.2
Ptch1Q61115 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC35.05■■■■□ 3.2
Ptch1Q61115 AC122317.2-201ENSMUST00000218708 1248 ntBASIC35.05■■■■□ 3.2
Ptch1Q61115 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
Ptch1Q61115 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Ptch1Q61115 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Ptch1Q61115 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
Ptch1Q61115 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
Ptch1Q61115 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC35■■■■□ 3.19
Ptch1Q61115 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Ptch1Q61115 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC34.99■■■■□ 3.19
Ptch1Q61115 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC34.99■■■■□ 3.19
Ptch1Q61115 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
Ptch1Q61115 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC34.98■■■■□ 3.19
Ptch1Q61115 Gm15546-201ENSMUST00000122095 826 ntBASIC34.98■■■■□ 3.19
Ptch1Q61115 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Ptch1Q61115 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC34.97■■■■□ 3.19
Ptch1Q61115 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
Ptch1Q61115 Gm9812-201ENSMUST00000061934 968 ntBASIC34.96■■■■□ 3.19
Ptch1Q61115 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC34.96■■■■□ 3.19
Ptch1Q61115 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC34.94■■■■□ 3.18
Ptch1Q61115 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Ptch1Q61115 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC34.93■■■■□ 3.18
Ptch1Q61115 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC34.93■■■■□ 3.18
Ptch1Q61115 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC34.92■■■■□ 3.18
Ptch1Q61115 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Ptch1Q61115 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Ptch1Q61115 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC34.92■■■■□ 3.18
Ptch1Q61115 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC34.92■■■■□ 3.18
Ptch1Q61115 Gm5522-201ENSMUST00000189483 1242 ntBASIC34.91■■■■□ 3.18
Ptch1Q61115 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Ptch1Q61115 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ptch1Q61115 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ptch1Q61115 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ptch1Q61115 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Ptch1Q61115 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC34.89■■■■□ 3.18
Ptch1Q61115 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
Ptch1Q61115 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Ptch1Q61115 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ptch1Q61115 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ptch1Q61115 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC34.87■■■■□ 3.17
Ptch1Q61115 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
Ptch1Q61115 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ptch1Q61115 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Ptch1Q61115 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC34.86■■■■□ 3.17
Ptch1Q61115 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Ptch1Q61115 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC34.85■■■■□ 3.17
Ptch1Q61115 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC34.85■■■■□ 3.17
Ptch1Q61115 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC34.84■■■■□ 3.17
Ptch1Q61115 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Ptch1Q61115 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC34.84■■■■□ 3.17
Ptch1Q61115 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC34.84■■■■□ 3.17
Ptch1Q61115 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC34.84■■■■□ 3.17
Ptch1Q61115 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
Ptch1Q61115 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
Ptch1Q61115 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
Ptch1Q61115 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC34.82■■■■□ 3.17
Ptch1Q61115 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC34.82■■■■□ 3.17
Ptch1Q61115 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Ptch1Q61115 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC34.81■■■■□ 3.16
Ptch1Q61115 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Ptch1Q61115 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Ptch1Q61115 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC34.8■■■■□ 3.16
Ptch1Q61115 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
Ptch1Q61115 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC34.79■■■■□ 3.16
Ptch1Q61115 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
Ptch1Q61115 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC34.74■■■■□ 3.15
Ptch1Q61115 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Ptch1Q61115 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC34.74■■■■□ 3.15
Ptch1Q61115 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC34.74■■■■□ 3.15
Ptch1Q61115 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
Ptch1Q61115 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC34.73■■■■□ 3.15
Ptch1Q61115 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC34.71■■■■□ 3.15
Ptch1Q61115 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
Ptch1Q61115 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Ptch1Q61115 AC093043.1-201ENSMUST00000226700 898 ntBASIC34.7■■■■□ 3.15
Ptch1Q61115 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
Ptch1Q61115 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Ptch1Q61115 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms