Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scarb1Q61009 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scarb1Q61009 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scarb1Q61009 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scarb1Q61009 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Scarb1Q61009 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scarb1Q61009 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb1Q61009 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb1Q61009 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Scarb1Q61009 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb1Q61009 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Scarb1Q61009 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scarb1Q61009 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scarb1Q61009 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarb1Q61009 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarb1Q61009 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scarb1Q61009 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Scarb1Q61009 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scarb1Q61009 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scarb1Q61009 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scarb1Q61009 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Scarb1Q61009 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scarb1Q61009 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarb1Q61009 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scarb1Q61009 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Scarb1Q61009 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb1Q61009 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb1Q61009 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb1Q61009 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb1Q61009 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb1Q61009 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scarb1Q61009 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb1Q61009 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scarb1Q61009 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb1Q61009 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb1Q61009 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scarb1Q61009 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb1Q61009 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scarb1Q61009 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Scarb1Q61009 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Scarb1Q61009 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scarb1Q61009 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scarb1Q61009 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scarb1Q61009 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.38■□□□□ 0.69
Scarb1Q61009 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.38■□□□□ 0.69
Scarb1Q61009 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scarb1Q61009 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scarb1Q61009 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scarb1Q61009 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scarb1Q61009 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scarb1Q61009 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scarb1Q61009 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scarb1Q61009 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scarb1Q61009 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.36■□□□□ 0.69
Scarb1Q61009 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.36■□□□□ 0.69
Scarb1Q61009 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scarb1Q61009 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scarb1Q61009 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scarb1Q61009 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Scarb1Q61009 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Scarb1Q61009 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scarb1Q61009 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scarb1Q61009 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scarb1Q61009 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scarb1Q61009 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scarb1Q61009 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scarb1Q61009 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Scarb1Q61009 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.34■□□□□ 0.69
Scarb1Q61009 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scarb1Q61009 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scarb1Q61009 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scarb1Q61009 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scarb1Q61009 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Scarb1Q61009 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scarb1Q61009 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scarb1Q61009 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scarb1Q61009 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scarb1Q61009 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Scarb1Q61009 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Scarb1Q61009 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scarb1Q61009 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Scarb1Q61009 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scarb1Q61009 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarb1Q61009 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarb1Q61009 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarb1Q61009 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scarb1Q61009 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.3■□□□□ 0.68
Scarb1Q61009 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.3■□□□□ 0.68
Scarb1Q61009 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.3■□□□□ 0.68
Scarb1Q61009 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scarb1Q61009 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scarb1Q61009 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scarb1Q61009 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scarb1Q61009 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scarb1Q61009 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scarb1Q61009 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Scarb1Q61009 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scarb1Q61009 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scarb1Q61009 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scarb1Q61009 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms