Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NfkbibQ60778 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.37■■■□□ 2.13
NfkbibQ60778 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.37■■■□□ 2.13
NfkbibQ60778 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
NfkbibQ60778 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
NfkbibQ60778 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
NfkbibQ60778 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.36■■■□□ 2.13
NfkbibQ60778 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
NfkbibQ60778 Gm6311-201ENSMUST00000073790 878 ntBASIC28.35■■■□□ 2.13
NfkbibQ60778 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NfkbibQ60778 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
NfkbibQ60778 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.34■■■□□ 2.13
NfkbibQ60778 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.34■■■□□ 2.13
NfkbibQ60778 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NfkbibQ60778 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NfkbibQ60778 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NfkbibQ60778 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.32■■■□□ 2.12
NfkbibQ60778 Mir3960-201ENSMUST00000198213 73 ntBASIC28.32■■■□□ 2.12
NfkbibQ60778 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.32■■■□□ 2.12
NfkbibQ60778 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NfkbibQ60778 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NfkbibQ60778 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NfkbibQ60778 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.31■■■□□ 2.12
NfkbibQ60778 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NfkbibQ60778 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NfkbibQ60778 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NfkbibQ60778 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.3■■■□□ 2.12
NfkbibQ60778 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
NfkbibQ60778 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
NfkbibQ60778 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
NfkbibQ60778 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NfkbibQ60778 Gm45364-201ENSMUST00000210883 159 ntBASIC28.27■■■□□ 2.12
NfkbibQ60778 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
NfkbibQ60778 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
NfkbibQ60778 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.25■■■□□ 2.11
NfkbibQ60778 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.25■■■□□ 2.11
NfkbibQ60778 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
NfkbibQ60778 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
NfkbibQ60778 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NfkbibQ60778 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NfkbibQ60778 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NfkbibQ60778 Gm11175-201ENSMUST00000116172 543 ntBASIC28.22■■■□□ 2.11
NfkbibQ60778 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NfkbibQ60778 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NfkbibQ60778 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.21■■■□□ 2.11
NfkbibQ60778 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NfkbibQ60778 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.21■■■□□ 2.11
NfkbibQ60778 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NfkbibQ60778 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
NfkbibQ60778 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NfkbibQ60778 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NfkbibQ60778 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NfkbibQ60778 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
NfkbibQ60778 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NfkbibQ60778 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.18■■■□□ 2.1
NfkbibQ60778 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.18■■■□□ 2.1
NfkbibQ60778 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
NfkbibQ60778 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
NfkbibQ60778 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
NfkbibQ60778 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
NfkbibQ60778 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
NfkbibQ60778 Gm9812-201ENSMUST00000061934 968 ntBASIC28.16■■■□□ 2.1
NfkbibQ60778 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NfkbibQ60778 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NfkbibQ60778 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NfkbibQ60778 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NfkbibQ60778 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NfkbibQ60778 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NfkbibQ60778 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NfkbibQ60778 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
NfkbibQ60778 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.13■■■□□ 2.09
NfkbibQ60778 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
NfkbibQ60778 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
NfkbibQ60778 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NfkbibQ60778 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.11■■■□□ 2.09
NfkbibQ60778 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NfkbibQ60778 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.1■■■□□ 2.09
NfkbibQ60778 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
NfkbibQ60778 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
NfkbibQ60778 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
NfkbibQ60778 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NfkbibQ60778 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
NfkbibQ60778 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.09■■■□□ 2.09
NfkbibQ60778 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.09■■■□□ 2.09
NfkbibQ60778 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.08■■■□□ 2.09
NfkbibQ60778 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
NfkbibQ60778 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NfkbibQ60778 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NfkbibQ60778 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
NfkbibQ60778 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NfkbibQ60778 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
NfkbibQ60778 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.07■■■□□ 2.08
NfkbibQ60778 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.07■■■□□ 2.08
NfkbibQ60778 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
NfkbibQ60778 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
NfkbibQ60778 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
NfkbibQ60778 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.06■■■□□ 2.08
NfkbibQ60778 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
NfkbibQ60778 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
NfkbibQ60778 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms