Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TTC39BQ5VTQ0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TTC39BQ5VTQ0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
TTC39BQ5VTQ0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TTC39BQ5VTQ0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TTC39BQ5VTQ0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.44■■□□□ 1.82
TTC39BQ5VTQ0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.43■■□□□ 1.82
TTC39BQ5VTQ0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TTC39BQ5VTQ0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.43■■□□□ 1.82
TTC39BQ5VTQ0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TTC39BQ5VTQ0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.43■■□□□ 1.82
TTC39BQ5VTQ0 AC016575.1-201ENST00000607026 382 ntBASIC26.43■■□□□ 1.82
TTC39BQ5VTQ0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
TTC39BQ5VTQ0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.41■■□□□ 1.82
TTC39BQ5VTQ0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TTC39BQ5VTQ0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TTC39BQ5VTQ0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.4■■□□□ 1.82
TTC39BQ5VTQ0 AL139393.2-201ENST00000608721 2025 ntBASIC26.4■■□□□ 1.82
TTC39BQ5VTQ0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
TTC39BQ5VTQ0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.4■■□□□ 1.82
TTC39BQ5VTQ0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TTC39BQ5VTQ0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
TTC39BQ5VTQ0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TTC39BQ5VTQ0 MIR639-201ENST00000384974 98 ntBASIC26.39■■□□□ 1.82
TTC39BQ5VTQ0 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.39■■□□□ 1.82
TTC39BQ5VTQ0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.39■■□□□ 1.82
TTC39BQ5VTQ0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TTC39BQ5VTQ0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.38■■□□□ 1.81
TTC39BQ5VTQ0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
TTC39BQ5VTQ0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.37■■□□□ 1.81
TTC39BQ5VTQ0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TTC39BQ5VTQ0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
TTC39BQ5VTQ0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TTC39BQ5VTQ0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.36■■□□□ 1.81
TTC39BQ5VTQ0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TTC39BQ5VTQ0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC39BQ5VTQ0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TTC39BQ5VTQ0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.34■■□□□ 1.81
TTC39BQ5VTQ0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39BQ5VTQ0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.33■■□□□ 1.81
TTC39BQ5VTQ0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.33■■□□□ 1.81
TTC39BQ5VTQ0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39BQ5VTQ0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TTC39BQ5VTQ0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39BQ5VTQ0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39BQ5VTQ0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39BQ5VTQ0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39BQ5VTQ0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39BQ5VTQ0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TTC39BQ5VTQ0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TTC39BQ5VTQ0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.3■■□□□ 1.8
TTC39BQ5VTQ0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39BQ5VTQ0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39BQ5VTQ0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.3■■□□□ 1.8
TTC39BQ5VTQ0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39BQ5VTQ0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39BQ5VTQ0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.3■■□□□ 1.8
TTC39BQ5VTQ0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
TTC39BQ5VTQ0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.29■■□□□ 1.8
TTC39BQ5VTQ0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TTC39BQ5VTQ0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
TTC39BQ5VTQ0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.28■■□□□ 1.8
TTC39BQ5VTQ0 AC110285.7-201ENST00000624417 1536 ntBASIC26.28■■□□□ 1.8
TTC39BQ5VTQ0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TTC39BQ5VTQ0 MIR4449-201ENST00000578365 66 ntBASIC26.27■■□□□ 1.8
TTC39BQ5VTQ0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.27■■□□□ 1.8
TTC39BQ5VTQ0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TTC39BQ5VTQ0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39BQ5VTQ0 DRD5P2-201ENST00000421395 2012 ntBASIC26.26■■□□□ 1.79
TTC39BQ5VTQ0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39BQ5VTQ0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.26■■□□□ 1.79
TTC39BQ5VTQ0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TTC39BQ5VTQ0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TTC39BQ5VTQ0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TTC39BQ5VTQ0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.24■■□□□ 1.79
TTC39BQ5VTQ0 AC008813.1-201ENST00000536597 885 ntBASIC26.24■■□□□ 1.79
TTC39BQ5VTQ0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.24■■□□□ 1.79
TTC39BQ5VTQ0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
TTC39BQ5VTQ0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
TTC39BQ5VTQ0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.24■■□□□ 1.79
TTC39BQ5VTQ0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.23■■□□□ 1.79
TTC39BQ5VTQ0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.23■■□□□ 1.79
TTC39BQ5VTQ0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
TTC39BQ5VTQ0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TTC39BQ5VTQ0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.22■■□□□ 1.79
TTC39BQ5VTQ0 AC100797.4-201ENST00000631653 1827 ntBASIC26.21■■□□□ 1.79
TTC39BQ5VTQ0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39BQ5VTQ0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39BQ5VTQ0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
TTC39BQ5VTQ0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39BQ5VTQ0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
TTC39BQ5VTQ0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
TTC39BQ5VTQ0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TTC39BQ5VTQ0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.79
TTC39BQ5VTQ0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
TTC39BQ5VTQ0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
TTC39BQ5VTQ0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
TTC39BQ5VTQ0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
TTC39BQ5VTQ0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TTC39BQ5VTQ0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms