Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.833e-7■■■■■ 42
DDX59Q5T1V6 FOXP1-203ENST00000327590 5685 ntTSL 27.39□□□□□ -1.233e-7■■■■■ 42
DDX59Q5T1V6 STXBP1-214ENST00000635950 2771 ntTSL 519.6■□□□□ 0.733e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-210ENST00000627871 538 ntTSL 317.18■□□□□ 0.343e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-213ENST00000630492 572 ntTSL 517.18■□□□□ 0.343e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.91■□□□□ 0.33e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.09■□□□□ 0.173e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.233e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.86□□□□□ -0.353e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-217ENST00000637060 3825 ntTSL 512.74□□□□□ -0.373e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC12.29□□□□□ -0.443e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-219ENST00000637464 4893 ntTSL 512.2□□□□□ -0.463e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC12.16□□□□□ -0.463e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-218ENST00000637173 4193 ntTSL 5 BASIC11.72□□□□□ -0.533e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-215ENST00000636509 3949 ntTSL 510.72□□□□□ -0.693e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-209ENST00000626539 3840 ntTSL 5 BASIC10.06□□□□□ -0.83e-9■■■■■ 42
DDX59Q5T1V6 STXBP1-206ENST00000625363 550 ntTSL 48.75□□□□□ -1.013e-9■■■■■ 42
DDX59Q5T1V6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.473e-8■■■■■ 41.9
DDX59Q5T1V6 SASH1-202ENST00000367469 591 ntTSL 32.82□□□□□ -1.963e-8■■■■■ 41.9
DDX59Q5T1V6 GRINA-210ENST00000534791 1050 ntTSL 59.51□□□□□ -0.895e-12■■■■■ 41.5
DDX59Q5T1V6 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.81□□□□□ -1.167e-7■■■■■ 41.5
DDX59Q5T1V6 PDE4D-222ENST00000514552 494 ntTSL 35.91□□□□□ -1.467e-7■■■■■ 41.5
DDX59Q5T1V6 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.24□□□□□ -1.577e-7■■■■■ 41.5
DDX59Q5T1V6 PDE4D-215ENST00000506510 558 ntTSL 44.44□□□□□ -1.77e-7■■■■■ 41.5
DDX59Q5T1V6 PDE4D-219ENST00000511382 581 ntTSL 44.23□□□□□ -1.737e-7■■■■■ 41.5
DDX59Q5T1V6 PDE4D-217ENST00000509355 847 ntTSL 1 (best)3.93□□□□□ -1.787e-7■■■■■ 41.5
DDX59Q5T1V6 PDE4D-214ENST00000506024 599 ntTSL 43.49□□□□□ -1.857e-7■■■■■ 41.5
DDX59Q5T1V6 PDE4D-213ENST00000505507 577 ntTSL 43.3□□□□□ -1.887e-7■■■■■ 41.5
DDX59Q5T1V6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.24□□□□□ -0.138e-19■■■■■ 41.3
DDX59Q5T1V6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.24□□□□□ -0.138e-19■■■■■ 41.3
DDX59Q5T1V6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.03□□□□□ -0.168e-19■■■■■ 41.3
DDX59Q5T1V6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.168e-19■■■■■ 41.3
DDX59Q5T1V6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.188e-19■■■■■ 41.3
DDX59Q5T1V6 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)13.19□□□□□ -0.38e-19■■■■■ 41.3
DDX59Q5T1V6 SUN1-222ENST00000457861 2975 ntTSL 215.67■□□□□ 0.14e-7■■■■■ 41.3
DDX59Q5T1V6 CDC42BPB-204ENST00000559043 1999 ntTSL 514.87□□□□□ -0.031e-6■■■■■ 41.2
DDX59Q5T1V6 CNOT1-207ENST00000565605 739 ntTSL 48.7□□□□□ -1.023e-7■■■■■ 41.2
DDX59Q5T1V6 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.273e-7■■■■■ 41.2
DDX59Q5T1V6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.23□□□□□ -1.413e-7■■■■■ 41.2
DDX59Q5T1V6 CNOT1-211ENST00000567188 7830 ntTSL 1 (best)5.84□□□□□ -1.483e-7■■■■■ 41.2
DDX59Q5T1V6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.683e-7■■■■■ 41.2
DDX59Q5T1V6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.62□□□□□ -1.993e-7■■■■■ 41.2
DDX59Q5T1V6 ZNF598-206ENST00000564824 2147 ntTSL 524.37■■□□□ 1.491e-6■■■■■ 41.1
DDX59Q5T1V6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.251e-6■■■■■ 41.1
DDX59Q5T1V6 ZNF598-207ENST00000565396 4457 ntTSL 218.88■□□□□ 0.611e-6■■■■■ 41.1
DDX59Q5T1V6 ZNF598-203ENST00000562988 3382 ntTSL 518.71■□□□□ 0.591e-6■■■■■ 41.1
DDX59Q5T1V6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.571e-6■■■■■ 41.1
DDX59Q5T1V6 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.183e-8■■■■■ 41.1
DDX59Q5T1V6 MED13L-203ENST00000548743 568 ntTSL 36.92□□□□□ -1.33e-8■■■■■ 41.1
DDX59Q5T1V6 MED13L-207ENST00000551197 489 ntTSL 55.34□□□□□ -1.553e-8■■■■■ 41.1
DDX59Q5T1V6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.094e-7■■■■■ 41
DDX59Q5T1V6 ZCCHC7-203ENST00000461038 2793 ntTSL 1 (best)15.17■□□□□ 0.024e-8■■■■■ 41
DDX59Q5T1V6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.164e-8■■■■■ 41
DDX59Q5T1V6 ZCCHC7-206ENST00000488607 884 ntTSL 25.3□□□□□ -1.564e-8■■■■■ 41
DDX59Q5T1V6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.714e-8■■■■■ 41
DDX59Q5T1V6 LINC01529-201ENST00000433059 2167 ntTSL 216.03■□□□□ 0.165e-7■■■■■ 40.9
DDX59Q5T1V6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.47■□□□□ 0.075e-7■■■■■ 40.9
DDX59Q5T1V6 LINC01529-202ENST00000564335 844 ntTSL 315.43■□□□□ 0.065e-7■■■■■ 40.9
DDX59Q5T1V6 LINC01529-203ENST00000567313 552 ntTSL 411.13□□□□□ -0.635e-7■■■■■ 40.9
DDX59Q5T1V6 LINC01529-207ENST00000637448 810 ntTSL 5 BASIC10.46□□□□□ -0.735e-7■■■■■ 40.9
DDX59Q5T1V6 RAB11FIP3-210ENST00000487899 669 ntTSL 310.08□□□□□ -0.83e-8■■■■■ 40.8
DDX59Q5T1V6 U2AF2-203ENST00000587196 778 ntTSL 312.63□□□□□ -0.393e-7■■■■■ 40.8
DDX59Q5T1V6 PKD1-230ENST00000565639 1976 ntTSL 518.22■□□□□ 0.519e-7■■■■■ 40.8
DDX59Q5T1V6 PKD1-224ENST00000561991 964 ntTSL 516.13■□□□□ 0.179e-7■■■■■ 40.8
DDX59Q5T1V6 PKD1-234ENST00000567946 1822 ntTSL 515.57■□□□□ 0.089e-7■■■■■ 40.8
DDX59Q5T1V6 PKD1-222ENST00000496574 4419 ntTSL 513.84□□□□□ -0.199e-7■■■■■ 40.8
DDX59Q5T1V6 PKD1-202ENST00000415938 3386 ntTSL 513.21□□□□□ -0.39e-7■■■■■ 40.8
DDX59Q5T1V6 PKD1-219ENST00000486339 4443 ntTSL 512.99□□□□□ -0.339e-7■■■■■ 40.8
DDX59Q5T1V6 PKD1-216ENST00000483731 4193 ntTSL 512.08□□□□□ -0.489e-7■■■■■ 40.8
DDX59Q5T1V6 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.022e-9■■■■■ 40.6
DDX59Q5T1V6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.158e-7■■■■■ 40.6
DDX59Q5T1V6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.66■□□□□ 0.18e-7■■■■■ 40.6
DDX59Q5T1V6 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.398e-7■■■■■ 40.6
DDX59Q5T1V6 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.48e-7■■■■■ 40.6
DDX59Q5T1V6 MBD6-212ENST00000552163 570 ntTSL 318.98■□□□□ 0.632e-8■■■■■ 40.6
DDX59Q5T1V6 EEA1-205ENST00000553019 558 ntTSL 517.46■□□□□ 0.392e-8■■■■■ 40.6
DDX59Q5T1V6 EEA1-203ENST00000547833 661 ntTSL 317.27■□□□□ 0.362e-8■■■■■ 40.6
DDX59Q5T1V6 EEA1-202ENST00000418984 2542 ntTSL 516.66■□□□□ 0.262e-8■■■■■ 40.6
DDX59Q5T1V6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.52■□□□□ 0.232e-8■■■■■ 40.6
DDX59Q5T1V6 TRIM62-203ENST00000486583 306 ntTSL 316.5■□□□□ 0.232e-8■■■■■ 40.6
DDX59Q5T1V6 TRIM62-202ENST00000485148 806 ntTSL 215.23■□□□□ 0.032e-8■■■■■ 40.6
DDX59Q5T1V6 PRKAR1B-205ENST00000414568 752 ntTSL 515.12■□□□□ 0.011e-6■■■■■ 40.6
DDX59Q5T1V6 SOD2-209ENST00000535561 551 ntTSL 313.31□□□□□ -0.282e-8■■■■■ 40.6
DDX59Q5T1V6 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.53□□□□□ -0.42e-8■■■■■ 40.6
DDX59Q5T1V6 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.452e-8■■■■■ 40.6
DDX59Q5T1V6 SOD2-204ENST00000401980 523 ntTSL 411.82□□□□□ -0.522e-8■■■■■ 40.6
DDX59Q5T1V6 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.542e-8■■■■■ 40.6
DDX59Q5T1V6 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC11.66□□□□□ -0.542e-8■■■■■ 40.6
DDX59Q5T1V6 CAMTA2-208ENST00000572543 4496 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.592e-8■■■■■ 40.6
DDX59Q5T1V6 SOD2-214ENST00000545162 571 ntTSL 311.13□□□□□ -0.632e-8■■■■■ 40.6
DDX59Q5T1V6 CAMTA2-203ENST00000381311 4374 ntTSL 1 (best) BASIC10.62□□□□□ -0.712e-8■■■■■ 40.6
DDX59Q5T1V6 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.792e-8■■■■■ 40.6
DDX59Q5T1V6 SOD2-210ENST00000537657 507 ntTSL 29.53□□□□□ -0.882e-8■■■■■ 40.6
DDX59Q5T1V6 CAMTA2-209ENST00000573004 962 ntTSL 28.87□□□□□ -0.992e-8■■■■■ 40.6
DDX59Q5T1V6 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.352e-7■■■■■ 40.5
DDX59Q5T1V6 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.352e-7■■■■■ 40.5
DDX59Q5T1V6 NACA-209ENST00000548084 542 ntTSL 311.15□□□□□ -0.622e-7■■■■■ 40.5
DDX59Q5T1V6 NACA-201ENST00000356769 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.712e-7■■■■■ 40.5
DDX59Q5T1V6 NACA-212ENST00000549259 690 ntTSL 510.43□□□□□ -0.742e-7■■■■■ 40.5
DDX59Q5T1V6 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.092e-7■■■■■ 40.5
Retrieved 100 of 7,289 protein–RNA pairs in 239.3 ms