Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC30.46■■■□□ 2.47
Trpm3Q5F4S9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Trpm3Q5F4S9 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.44■■■□□ 2.46
Trpm3Q5F4S9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Trpm3Q5F4S9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Trpm3Q5F4S9 Mir3960-201ENSMUST00000198213 73 ntBASIC30.44■■■□□ 2.46
Trpm3Q5F4S9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.43■■■□□ 2.46
Trpm3Q5F4S9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Trpm3Q5F4S9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Trpm3Q5F4S9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Trpm3Q5F4S9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Trpm3Q5F4S9 Gm13889-201ENSMUST00000099689 1386 ntBASIC30.38■■■□□ 2.45
Trpm3Q5F4S9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Trpm3Q5F4S9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC30.37■■■□□ 2.45
Trpm3Q5F4S9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30.37■■■□□ 2.45
Trpm3Q5F4S9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC30.37■■■□□ 2.45
Trpm3Q5F4S9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Trpm3Q5F4S9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Trpm3Q5F4S9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
Trpm3Q5F4S9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Trpm3Q5F4S9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC30.34■■■□□ 2.45
Trpm3Q5F4S9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Trpm3Q5F4S9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Trpm3Q5F4S9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Trpm3Q5F4S9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC30.33■■■□□ 2.45
Trpm3Q5F4S9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Trpm3Q5F4S9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Trpm3Q5F4S9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Trpm3Q5F4S9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Trpm3Q5F4S9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Trpm3Q5F4S9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC30.3■■■□□ 2.44
Trpm3Q5F4S9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Trpm3Q5F4S9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.29■■■□□ 2.44
Trpm3Q5F4S9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Trpm3Q5F4S9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Trpm3Q5F4S9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Trpm3Q5F4S9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Trpm3Q5F4S9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Trpm3Q5F4S9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Trpm3Q5F4S9 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.27■■■□□ 2.44
Trpm3Q5F4S9 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.27■■■□□ 2.44
Trpm3Q5F4S9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Trpm3Q5F4S9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.26■■■□□ 2.43
Trpm3Q5F4S9 Gm12818-201ENSMUST00000117562 1349 ntBASIC30.26■■■□□ 2.43
Trpm3Q5F4S9 Scarna2-201ENSMUST00000157560 414 ntBASIC30.25■■■□□ 2.43
Trpm3Q5F4S9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.24■■■□□ 2.43
Trpm3Q5F4S9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Trpm3Q5F4S9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Trpm3Q5F4S9 Gm9806-201ENSMUST00000051080 552 ntBASIC30.24■■■□□ 2.43
Trpm3Q5F4S9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
Trpm3Q5F4S9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 Gm12366-201ENSMUST00000121722 873 ntBASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 Gm5786-201ENSMUST00000085368 882 ntBASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Trpm3Q5F4S9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
Trpm3Q5F4S9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Trpm3Q5F4S9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Trpm3Q5F4S9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC30.2■■■□□ 2.43
Trpm3Q5F4S9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC30.2■■■□□ 2.43
Trpm3Q5F4S9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC30.2■■■□□ 2.43
Trpm3Q5F4S9 Gm4799-201ENSMUST00000095396 657 ntBASIC30.2■■■□□ 2.43
Trpm3Q5F4S9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC30.2■■■□□ 2.42
Trpm3Q5F4S9 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.2■■■□□ 2.42
Trpm3Q5F4S9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Trpm3Q5F4S9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Trpm3Q5F4S9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Trpm3Q5F4S9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Trpm3Q5F4S9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Trpm3Q5F4S9 Gm11687-201ENSMUST00000118911 886 ntBASIC30.17■■■□□ 2.42
Trpm3Q5F4S9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC30.17■■■□□ 2.42
Trpm3Q5F4S9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trpm3Q5F4S9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trpm3Q5F4S9 Gm9812-201ENSMUST00000061934 968 ntBASIC30.15■■■□□ 2.42
Trpm3Q5F4S9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trpm3Q5F4S9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Trpm3Q5F4S9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC30.12■■■□□ 2.41
Trpm3Q5F4S9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Trpm3Q5F4S9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC30.11■■■□□ 2.41
Trpm3Q5F4S9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Trpm3Q5F4S9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trpm3Q5F4S9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trpm3Q5F4S9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Trpm3Q5F4S9 AC151971.4-201ENSMUST00000214717 704 ntBASIC30.09■■■□□ 2.41
Trpm3Q5F4S9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Trpm3Q5F4S9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Trpm3Q5F4S9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
Trpm3Q5F4S9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
Trpm3Q5F4S9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Trpm3Q5F4S9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Trpm3Q5F4S9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Trpm3Q5F4S9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Trpm3Q5F4S9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms