Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LINC01554Q52M75 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01554Q52M75 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01554Q52M75 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC01554Q52M75 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01554Q52M75 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LINC01554Q52M75 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC01554Q52M75 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
LINC01554Q52M75 AL121603.2-201ENST00000557373 2117 ntBASIC12.65□□□□□ -0.38
LINC01554Q52M75 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
LINC01554Q52M75 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC01554Q52M75 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC12.65□□□□□ -0.39
LINC01554Q52M75 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC01554Q52M75 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01554Q52M75 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01554Q52M75 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC01554Q52M75 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
LINC01554Q52M75 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LINC01554Q52M75 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC01554Q52M75 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC01554Q52M75 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC01554Q52M75 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
LINC01554Q52M75 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC01554Q52M75 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC01554Q52M75 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC01554Q52M75 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01554Q52M75 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01554Q52M75 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
LINC01554Q52M75 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01554Q52M75 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LINC01554Q52M75 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC01554Q52M75 AL024507.2-201ENST00000606070 2574 ntBASIC12.62□□□□□ -0.39
LINC01554Q52M75 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LINC01554Q52M75 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 AC015813.7-201ENST00000623294 581 ntBASIC12.61□□□□□ -0.39
LINC01554Q52M75 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC01554Q52M75 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC01554Q52M75 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01554Q52M75 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC01554Q52M75 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC01554Q52M75 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01554Q52M75 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01554Q52M75 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01554Q52M75 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01554Q52M75 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01554Q52M75 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01554Q52M75 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LINC01554Q52M75 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01554Q52M75 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01554Q52M75 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01554Q52M75 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01554Q52M75 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01554Q52M75 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01554Q52M75 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
LINC01554Q52M75 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01554Q52M75 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01554Q52M75 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01554Q52M75 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01554Q52M75 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01554Q52M75 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01554Q52M75 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LINC01554Q52M75 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01554Q52M75 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01554Q52M75 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LINC01554Q52M75 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LINC01554Q52M75 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01554Q52M75 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LINC01554Q52M75 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 AC133561.1-201ENST00000568600 2415 ntBASIC12.55□□□□□ -0.4
LINC01554Q52M75 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01554Q52M75 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LINC01554Q52M75 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 THRA-202ENST00000394121 2260 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01554Q52M75 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC01554Q52M75 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01554Q52M75 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01554Q52M75 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01554Q52M75 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01554Q52M75 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01554Q52M75 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC01554Q52M75 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01554Q52M75 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01554Q52M75 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01554Q52M75 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01554Q52M75 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01554Q52M75 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms