Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.46■■□□□ 1.83
Srrm1Q52KI8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Srrm1Q52KI8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Srrm1Q52KI8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Srrm1Q52KI8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.46■■□□□ 1.83
Srrm1Q52KI8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Srrm1Q52KI8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Srrm1Q52KI8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Srrm1Q52KI8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Srrm1Q52KI8 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.45■■□□□ 1.82
Srrm1Q52KI8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Srrm1Q52KI8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Srrm1Q52KI8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Srrm1Q52KI8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Srrm1Q52KI8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.43■■□□□ 1.82
Srrm1Q52KI8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Srrm1Q52KI8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Srrm1Q52KI8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Srrm1Q52KI8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Srrm1Q52KI8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Srrm1Q52KI8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Srrm1Q52KI8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.41■■□□□ 1.82
Srrm1Q52KI8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.4■■□□□ 1.82
Srrm1Q52KI8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.4■■□□□ 1.82
Srrm1Q52KI8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.4■■□□□ 1.82
Srrm1Q52KI8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Srrm1Q52KI8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Srrm1Q52KI8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Srrm1Q52KI8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Srrm1Q52KI8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Srrm1Q52KI8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.39■■□□□ 1.82
Srrm1Q52KI8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.39■■□□□ 1.82
Srrm1Q52KI8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.39■■□□□ 1.82
Srrm1Q52KI8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Srrm1Q52KI8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Srrm1Q52KI8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.38■■□□□ 1.81
Srrm1Q52KI8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Srrm1Q52KI8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Srrm1Q52KI8 Gm5812-201ENSMUST00000061073 957 ntBASIC26.38■■□□□ 1.81
Srrm1Q52KI8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Srrm1Q52KI8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Srrm1Q52KI8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Srrm1Q52KI8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Srrm1Q52KI8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Srrm1Q52KI8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Srrm1Q52KI8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Srrm1Q52KI8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Srrm1Q52KI8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Srrm1Q52KI8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Srrm1Q52KI8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.35■■□□□ 1.81
Srrm1Q52KI8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.34■■□□□ 1.81
Srrm1Q52KI8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.33■■□□□ 1.81
Srrm1Q52KI8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Srrm1Q52KI8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Srrm1Q52KI8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Srrm1Q52KI8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Srrm1Q52KI8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Srrm1Q52KI8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Srrm1Q52KI8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Srrm1Q52KI8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Srrm1Q52KI8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Srrm1Q52KI8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Srrm1Q52KI8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Srrm1Q52KI8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Srrm1Q52KI8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Srrm1Q52KI8 Gm10420-201ENSMUST00000121713 882 ntBASIC26.29■■□□□ 1.8
Srrm1Q52KI8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Srrm1Q52KI8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Srrm1Q52KI8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Srrm1Q52KI8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Srrm1Q52KI8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Srrm1Q52KI8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Srrm1Q52KI8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Srrm1Q52KI8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Srrm1Q52KI8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Srrm1Q52KI8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Srrm1Q52KI8 Gm5921-201ENSMUST00000075898 882 ntBASIC26.24■■□□□ 1.79
Srrm1Q52KI8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Srrm1Q52KI8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.23■■□□□ 1.79
Srrm1Q52KI8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Srrm1Q52KI8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Srrm1Q52KI8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Srrm1Q52KI8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.22■■□□□ 1.79
Srrm1Q52KI8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Srrm1Q52KI8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Srrm1Q52KI8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Srrm1Q52KI8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Srrm1Q52KI8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.2■■□□□ 1.78
Srrm1Q52KI8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Srrm1Q52KI8 Gm9812-201ENSMUST00000061934 968 ntBASIC26.2■■□□□ 1.78
Srrm1Q52KI8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Srrm1Q52KI8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.19■■□□□ 1.78
Srrm1Q52KI8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.19■■□□□ 1.78
Srrm1Q52KI8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.19■■□□□ 1.78
Srrm1Q52KI8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.18■■□□□ 1.78
Srrm1Q52KI8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.18■■□□□ 1.78
Srrm1Q52KI8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Srrm1Q52KI8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.17■■□□□ 1.78
Srrm1Q52KI8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Srrm1Q52KI8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms