Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.81■■□□□ 1.24
Rnf223Q3UV31 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf223Q3UV31 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf223Q3UV31 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf223Q3UV31 Gm45364-201ENSMUST00000210883 159 ntBASIC22.8■■□□□ 1.24
Rnf223Q3UV31 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf223Q3UV31 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Rnf223Q3UV31 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf223Q3UV31 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.79■■□□□ 1.24
Rnf223Q3UV31 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.79■■□□□ 1.24
Rnf223Q3UV31 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf223Q3UV31 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.78■■□□□ 1.24
Rnf223Q3UV31 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.78■■□□□ 1.24
Rnf223Q3UV31 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf223Q3UV31 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf223Q3UV31 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Rnf223Q3UV31 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Rnf223Q3UV31 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf223Q3UV31 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf223Q3UV31 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf223Q3UV31 Mir6538-201ENSMUST00000183713 110 ntBASIC22.75■■□□□ 1.23
Rnf223Q3UV31 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf223Q3UV31 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf223Q3UV31 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf223Q3UV31 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.74■■□□□ 1.23
Rnf223Q3UV31 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf223Q3UV31 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf223Q3UV31 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.73■■□□□ 1.23
Rnf223Q3UV31 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf223Q3UV31 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Rnf223Q3UV31 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf223Q3UV31 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf223Q3UV31 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf223Q3UV31 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf223Q3UV31 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf223Q3UV31 Scarna2-201ENSMUST00000157560 414 ntBASIC22.71■■□□□ 1.23
Rnf223Q3UV31 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.7■■□□□ 1.22
Rnf223Q3UV31 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf223Q3UV31 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf223Q3UV31 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf223Q3UV31 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf223Q3UV31 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.69■■□□□ 1.22
Rnf223Q3UV31 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf223Q3UV31 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf223Q3UV31 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf223Q3UV31 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf223Q3UV31 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf223Q3UV31 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf223Q3UV31 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf223Q3UV31 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf223Q3UV31 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Rnf223Q3UV31 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf223Q3UV31 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf223Q3UV31 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.66■■□□□ 1.22
Rnf223Q3UV31 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Rnf223Q3UV31 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf223Q3UV31 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf223Q3UV31 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf223Q3UV31 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf223Q3UV31 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf223Q3UV31 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf223Q3UV31 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf223Q3UV31 Gm9806-201ENSMUST00000051080 552 ntBASIC22.65■■□□□ 1.22
Rnf223Q3UV31 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.64■■□□□ 1.22
Rnf223Q3UV31 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.64■■□□□ 1.21
Rnf223Q3UV31 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.64■■□□□ 1.21
Rnf223Q3UV31 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf223Q3UV31 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf223Q3UV31 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf223Q3UV31 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf223Q3UV31 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf223Q3UV31 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf223Q3UV31 Gm16437-201ENSMUST00000025669 507 ntBASIC22.63■■□□□ 1.21
Rnf223Q3UV31 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Rnf223Q3UV31 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Rnf223Q3UV31 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf223Q3UV31 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf223Q3UV31 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rnf223Q3UV31 Gm9812-201ENSMUST00000061934 968 ntBASIC22.62■■□□□ 1.21
Rnf223Q3UV31 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.62■■□□□ 1.21
Rnf223Q3UV31 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
Rnf223Q3UV31 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.61■■□□□ 1.21
Rnf223Q3UV31 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf223Q3UV31 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf223Q3UV31 Gm11687-201ENSMUST00000118911 886 ntBASIC22.6■■□□□ 1.21
Rnf223Q3UV31 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf223Q3UV31 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf223Q3UV31 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf223Q3UV31 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf223Q3UV31 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.58■■□□□ 1.21
Rnf223Q3UV31 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf223Q3UV31 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf223Q3UV31 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf223Q3UV31 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Rnf223Q3UV31 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf223Q3UV31 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.56■■□□□ 1.2
Rnf223Q3UV31 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf223Q3UV31 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Rnf223Q3UV31 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf223Q3UV31 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms