Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shisa3Q3UPR0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa3Q3UPR0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa3Q3UPR0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa3Q3UPR0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Shisa3Q3UPR0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa3Q3UPR0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shisa3Q3UPR0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.08■□□□□ 0.81
Shisa3Q3UPR0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Shisa3Q3UPR0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Shisa3Q3UPR0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa3Q3UPR0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa3Q3UPR0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa3Q3UPR0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa3Q3UPR0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shisa3Q3UPR0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shisa3Q3UPR0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shisa3Q3UPR0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.06■□□□□ 0.8
Shisa3Q3UPR0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shisa3Q3UPR0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shisa3Q3UPR0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Shisa3Q3UPR0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.05■□□□□ 0.8
Shisa3Q3UPR0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Shisa3Q3UPR0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Shisa3Q3UPR0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Shisa3Q3UPR0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Shisa3Q3UPR0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa3Q3UPR0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa3Q3UPR0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.04■□□□□ 0.8
Shisa3Q3UPR0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa3Q3UPR0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa3Q3UPR0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa3Q3UPR0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa3Q3UPR0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shisa3Q3UPR0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shisa3Q3UPR0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shisa3Q3UPR0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shisa3Q3UPR0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shisa3Q3UPR0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Shisa3Q3UPR0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shisa3Q3UPR0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shisa3Q3UPR0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.02■□□□□ 0.8
Shisa3Q3UPR0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.01■□□□□ 0.79
Shisa3Q3UPR0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shisa3Q3UPR0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Shisa3Q3UPR0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shisa3Q3UPR0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shisa3Q3UPR0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shisa3Q3UPR0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20■□□□□ 0.79
Shisa3Q3UPR0 Gm24970-201ENSMUST00000175582 82 ntBASIC20■□□□□ 0.79
Shisa3Q3UPR0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20■□□□□ 0.79
Shisa3Q3UPR0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shisa3Q3UPR0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shisa3Q3UPR0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shisa3Q3UPR0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.99■□□□□ 0.79
Shisa3Q3UPR0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shisa3Q3UPR0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Shisa3Q3UPR0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shisa3Q3UPR0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Shisa3Q3UPR0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shisa3Q3UPR0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Shisa3Q3UPR0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Shisa3Q3UPR0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Shisa3Q3UPR0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Shisa3Q3UPR0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Shisa3Q3UPR0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shisa3Q3UPR0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.97■□□□□ 0.79
Shisa3Q3UPR0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shisa3Q3UPR0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shisa3Q3UPR0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shisa3Q3UPR0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shisa3Q3UPR0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shisa3Q3UPR0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shisa3Q3UPR0 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.95■□□□□ 0.78
Shisa3Q3UPR0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shisa3Q3UPR0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Shisa3Q3UPR0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shisa3Q3UPR0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Shisa3Q3UPR0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Shisa3Q3UPR0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shisa3Q3UPR0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Shisa3Q3UPR0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shisa3Q3UPR0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Shisa3Q3UPR0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shisa3Q3UPR0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shisa3Q3UPR0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Shisa3Q3UPR0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shisa3Q3UPR0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.92■□□□□ 0.78
Shisa3Q3UPR0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.92■□□□□ 0.78
Shisa3Q3UPR0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Shisa3Q3UPR0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shisa3Q3UPR0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.92■□□□□ 0.78
Shisa3Q3UPR0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa3Q3UPR0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa3Q3UPR0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.91■□□□□ 0.78
Shisa3Q3UPR0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa3Q3UPR0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa3Q3UPR0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa3Q3UPR0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Shisa3Q3UPR0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms