Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
Arhgef40Q3UPH7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Arhgef40Q3UPH7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Arhgef40Q3UPH7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Arhgef40Q3UPH7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC35.46■■■■□ 3.27
Arhgef40Q3UPH7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
Arhgef40Q3UPH7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC35.45■■■■□ 3.27
Arhgef40Q3UPH7 Gm12818-201ENSMUST00000117562 1349 ntBASIC35.45■■■■□ 3.27
Arhgef40Q3UPH7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC35.44■■■■□ 3.26
Arhgef40Q3UPH7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC35.44■■■■□ 3.26
Arhgef40Q3UPH7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Arhgef40Q3UPH7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC35.43■■■■□ 3.26
Arhgef40Q3UPH7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Arhgef40Q3UPH7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC35.42■■■■□ 3.26
Arhgef40Q3UPH7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC35.42■■■■□ 3.26
Arhgef40Q3UPH7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Arhgef40Q3UPH7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC35.41■■■■□ 3.26
Arhgef40Q3UPH7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
Arhgef40Q3UPH7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC35.39■■■■□ 3.26
Arhgef40Q3UPH7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC35.38■■■■□ 3.25
Arhgef40Q3UPH7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Arhgef40Q3UPH7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Arhgef40Q3UPH7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC35.37■■■■□ 3.25
Arhgef40Q3UPH7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC35.37■■■■□ 3.25
Arhgef40Q3UPH7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC35.36■■■■□ 3.25
Arhgef40Q3UPH7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC35.36■■■■□ 3.25
Arhgef40Q3UPH7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Arhgef40Q3UPH7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Arhgef40Q3UPH7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Arhgef40Q3UPH7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
Arhgef40Q3UPH7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Arhgef40Q3UPH7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Arhgef40Q3UPH7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Arhgef40Q3UPH7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
Arhgef40Q3UPH7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC35.32■■■■□ 3.25
Arhgef40Q3UPH7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
Arhgef40Q3UPH7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC35.32■■■■□ 3.24
Arhgef40Q3UPH7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
Arhgef40Q3UPH7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
Arhgef40Q3UPH7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Arhgef40Q3UPH7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC35.3■■■■□ 3.24
Arhgef40Q3UPH7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Arhgef40Q3UPH7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Arhgef40Q3UPH7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC35.29■■■■□ 3.24
Arhgef40Q3UPH7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Arhgef40Q3UPH7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Arhgef40Q3UPH7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Arhgef40Q3UPH7 Gm14121-201ENSMUST00000121441 1380 ntBASIC35.27■■■■□ 3.24
Arhgef40Q3UPH7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC35.26■■■■□ 3.24
Arhgef40Q3UPH7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
Arhgef40Q3UPH7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Arhgef40Q3UPH7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Arhgef40Q3UPH7 Gm9910-201ENSMUST00000195385 1550 ntBASIC35.24■■■■□ 3.23
Arhgef40Q3UPH7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Arhgef40Q3UPH7 Gm9812-201ENSMUST00000061934 968 ntBASIC35.24■■■■□ 3.23
Arhgef40Q3UPH7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC35.24■■■■□ 3.23
Arhgef40Q3UPH7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC35.24■■■■□ 3.23
Arhgef40Q3UPH7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Arhgef40Q3UPH7 Gm14523-201ENSMUST00000117260 558 ntBASIC35.23■■■■□ 3.23
Arhgef40Q3UPH7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Arhgef40Q3UPH7 Gm6206-201ENSMUST00000133472 2199 ntBASIC35.23■■■■□ 3.23
Arhgef40Q3UPH7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC35.22■■■■□ 3.23
Arhgef40Q3UPH7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
Arhgef40Q3UPH7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC35.22■■■■□ 3.23
Arhgef40Q3UPH7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC35.22■■■■□ 3.23
Arhgef40Q3UPH7 Gm7332-201ENSMUST00000118351 454 ntBASIC35.22■■■■□ 3.23
Arhgef40Q3UPH7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Arhgef40Q3UPH7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Arhgef40Q3UPH7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Arhgef40Q3UPH7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
Arhgef40Q3UPH7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Arhgef40Q3UPH7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC35.19■■■■□ 3.22
Arhgef40Q3UPH7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC35.19■■■■□ 3.22
Arhgef40Q3UPH7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Arhgef40Q3UPH7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Arhgef40Q3UPH7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Arhgef40Q3UPH7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Arhgef40Q3UPH7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Arhgef40Q3UPH7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC35.16■■■■□ 3.22
Arhgef40Q3UPH7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Arhgef40Q3UPH7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Arhgef40Q3UPH7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC35.14■■■■□ 3.22
Arhgef40Q3UPH7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC35.13■■■■□ 3.22
Arhgef40Q3UPH7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC35.13■■■■□ 3.21
Arhgef40Q3UPH7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC35.11■■■■□ 3.21
Arhgef40Q3UPH7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Arhgef40Q3UPH7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC35.11■■■■□ 3.21
Arhgef40Q3UPH7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Arhgef40Q3UPH7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC35.1■■■■□ 3.21
Arhgef40Q3UPH7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Arhgef40Q3UPH7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC35.09■■■■□ 3.21
Arhgef40Q3UPH7 Gm22567-201ENSMUST00000175542 342 ntBASIC35.08■■■■□ 3.21
Arhgef40Q3UPH7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Arhgef40Q3UPH7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC35.07■■■■□ 3.21
Arhgef40Q3UPH7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
Arhgef40Q3UPH7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC35.07■■■■□ 3.2
Arhgef40Q3UPH7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Arhgef40Q3UPH7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
Arhgef40Q3UPH7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Arhgef40Q3UPH7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms