Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
Uspl1Q3ULM6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Uspl1Q3ULM6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.52■■■□□ 2.48
Uspl1Q3ULM6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Uspl1Q3ULM6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
Uspl1Q3ULM6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Uspl1Q3ULM6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Uspl1Q3ULM6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC30.51■■■□□ 2.47
Uspl1Q3ULM6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Uspl1Q3ULM6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.49■■■□□ 2.47
Uspl1Q3ULM6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Uspl1Q3ULM6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Uspl1Q3ULM6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Uspl1Q3ULM6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Uspl1Q3ULM6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Uspl1Q3ULM6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Uspl1Q3ULM6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Uspl1Q3ULM6 Gm11599-201ENSMUST00000118720 878 ntBASIC30.46■■■□□ 2.47
Uspl1Q3ULM6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.46■■■□□ 2.47
Uspl1Q3ULM6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Uspl1Q3ULM6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
Uspl1Q3ULM6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.45■■■□□ 2.47
Uspl1Q3ULM6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Uspl1Q3ULM6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Uspl1Q3ULM6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Uspl1Q3ULM6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC30.43■■■□□ 2.46
Uspl1Q3ULM6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Uspl1Q3ULM6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Uspl1Q3ULM6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC30.42■■■□□ 2.46
Uspl1Q3ULM6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.42■■■□□ 2.46
Uspl1Q3ULM6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Uspl1Q3ULM6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Uspl1Q3ULM6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC30.41■■■□□ 2.46
Uspl1Q3ULM6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Uspl1Q3ULM6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
Uspl1Q3ULM6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC30.4■■■□□ 2.46
Uspl1Q3ULM6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Uspl1Q3ULM6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Uspl1Q3ULM6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Uspl1Q3ULM6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Uspl1Q3ULM6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
Uspl1Q3ULM6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Uspl1Q3ULM6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Uspl1Q3ULM6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Uspl1Q3ULM6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
Uspl1Q3ULM6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Uspl1Q3ULM6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Uspl1Q3ULM6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Uspl1Q3ULM6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Uspl1Q3ULM6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Uspl1Q3ULM6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Uspl1Q3ULM6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Uspl1Q3ULM6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Uspl1Q3ULM6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Uspl1Q3ULM6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Uspl1Q3ULM6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Uspl1Q3ULM6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Uspl1Q3ULM6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Uspl1Q3ULM6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Uspl1Q3ULM6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Uspl1Q3ULM6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Uspl1Q3ULM6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Uspl1Q3ULM6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
Uspl1Q3ULM6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
Uspl1Q3ULM6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Uspl1Q3ULM6 Gm4419-202ENSMUST00000226239 1431 ntBASIC30.24■■■□□ 2.43
Uspl1Q3ULM6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Uspl1Q3ULM6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Uspl1Q3ULM6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Uspl1Q3ULM6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.22■■■□□ 2.43
Uspl1Q3ULM6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.22■■■□□ 2.43
Uspl1Q3ULM6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Uspl1Q3ULM6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Uspl1Q3ULM6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Uspl1Q3ULM6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Uspl1Q3ULM6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Uspl1Q3ULM6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Uspl1Q3ULM6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Uspl1Q3ULM6 Gm13889-201ENSMUST00000099689 1386 ntBASIC30.17■■■□□ 2.42
Uspl1Q3ULM6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
Uspl1Q3ULM6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
Uspl1Q3ULM6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Uspl1Q3ULM6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Uspl1Q3ULM6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Uspl1Q3ULM6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
Uspl1Q3ULM6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Uspl1Q3ULM6 Gm4799-201ENSMUST00000095396 657 ntBASIC30.16■■■□□ 2.42
Uspl1Q3ULM6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Uspl1Q3ULM6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Uspl1Q3ULM6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Uspl1Q3ULM6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30.15■■■□□ 2.42
Uspl1Q3ULM6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Uspl1Q3ULM6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
Uspl1Q3ULM6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Uspl1Q3ULM6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Uspl1Q3ULM6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Uspl1Q3ULM6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC30.13■■■□□ 2.41
Uspl1Q3ULM6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Uspl1Q3ULM6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Uspl1Q3ULM6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms