Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ssbp4Q3U4B1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ssbp4Q3U4B1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ssbp4Q3U4B1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ssbp4Q3U4B1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ssbp4Q3U4B1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ssbp4Q3U4B1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssbp4Q3U4B1 Scarna2-201ENSMUST00000157560 414 ntBASIC19.63■□□□□ 0.73
Ssbp4Q3U4B1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.63■□□□□ 0.73
Ssbp4Q3U4B1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssbp4Q3U4B1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssbp4Q3U4B1 Gm11687-201ENSMUST00000118911 886 ntBASIC19.61■□□□□ 0.73
Ssbp4Q3U4B1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ssbp4Q3U4B1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ssbp4Q3U4B1 Gm45364-201ENSMUST00000210883 159 ntBASIC19.61■□□□□ 0.73
Ssbp4Q3U4B1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssbp4Q3U4B1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ssbp4Q3U4B1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssbp4Q3U4B1 Gm9806-201ENSMUST00000051080 552 ntBASIC19.61■□□□□ 0.73
Ssbp4Q3U4B1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssbp4Q3U4B1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssbp4Q3U4B1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ssbp4Q3U4B1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.6■□□□□ 0.73
Ssbp4Q3U4B1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssbp4Q3U4B1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.59■□□□□ 0.73
Ssbp4Q3U4B1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ssbp4Q3U4B1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ssbp4Q3U4B1 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.59■□□□□ 0.73
Ssbp4Q3U4B1 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.59■□□□□ 0.73
Ssbp4Q3U4B1 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.58■□□□□ 0.73
Ssbp4Q3U4B1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssbp4Q3U4B1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssbp4Q3U4B1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.57■□□□□ 0.72
Ssbp4Q3U4B1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssbp4Q3U4B1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssbp4Q3U4B1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssbp4Q3U4B1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssbp4Q3U4B1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ssbp4Q3U4B1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssbp4Q3U4B1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssbp4Q3U4B1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssbp4Q3U4B1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssbp4Q3U4B1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.55■□□□□ 0.72
Ssbp4Q3U4B1 Gm16437-201ENSMUST00000025669 507 ntBASIC19.55■□□□□ 0.72
Ssbp4Q3U4B1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssbp4Q3U4B1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.55■□□□□ 0.72
Ssbp4Q3U4B1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.55■□□□□ 0.72
Ssbp4Q3U4B1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.54■□□□□ 0.72
Ssbp4Q3U4B1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssbp4Q3U4B1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssbp4Q3U4B1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ssbp4Q3U4B1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssbp4Q3U4B1 Cap2-205ENSMUST00000225824 1634 ntBASIC19.51■□□□□ 0.71
Ssbp4Q3U4B1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssbp4Q3U4B1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssbp4Q3U4B1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.51■□□□□ 0.71
Ssbp4Q3U4B1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.51■□□□□ 0.71
Ssbp4Q3U4B1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssbp4Q3U4B1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssbp4Q3U4B1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.5■□□□□ 0.71
Ssbp4Q3U4B1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssbp4Q3U4B1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ssbp4Q3U4B1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.49■□□□□ 0.71
Ssbp4Q3U4B1 Gm9812-201ENSMUST00000061934 968 ntBASIC19.49■□□□□ 0.71
Ssbp4Q3U4B1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ssbp4Q3U4B1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssbp4Q3U4B1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.48■□□□□ 0.71
Ssbp4Q3U4B1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssbp4Q3U4B1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssbp4Q3U4B1 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.47■□□□□ 0.71
Ssbp4Q3U4B1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssbp4Q3U4B1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.46■□□□□ 0.71
Ssbp4Q3U4B1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.45■□□□□ 0.7
Ssbp4Q3U4B1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ssbp4Q3U4B1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ssbp4Q3U4B1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssbp4Q3U4B1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssbp4Q3U4B1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.43■□□□□ 0.7
Ssbp4Q3U4B1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssbp4Q3U4B1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssbp4Q3U4B1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssbp4Q3U4B1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssbp4Q3U4B1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssbp4Q3U4B1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssbp4Q3U4B1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.42■□□□□ 0.7
Ssbp4Q3U4B1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ssbp4Q3U4B1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssbp4Q3U4B1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssbp4Q3U4B1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssbp4Q3U4B1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.41■□□□□ 0.7
Ssbp4Q3U4B1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssbp4Q3U4B1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ssbp4Q3U4B1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssbp4Q3U4B1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssbp4Q3U4B1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssbp4Q3U4B1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.39■□□□□ 0.7
Ssbp4Q3U4B1 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.39■□□□□ 0.7
Ssbp4Q3U4B1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssbp4Q3U4B1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.39■□□□□ 0.69
Ssbp4Q3U4B1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms