Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Q3U1D9 Gm11687-201ENSMUST00000118911 886 ntBASIC20.28■□□□□ 0.84
Q3U1D9 Scarna2-201ENSMUST00000157560 414 ntBASIC20.28■□□□□ 0.84
Q3U1D9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q3U1D9 Gm9806-201ENSMUST00000051080 552 ntBASIC20.28■□□□□ 0.84
Q3U1D9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.27■□□□□ 0.84
Q3U1D9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Q3U1D9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q3U1D9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q3U1D9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.26■□□□□ 0.83
Q3U1D9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q3U1D9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q3U1D9 Gm45364-201ENSMUST00000210883 159 ntBASIC20.26■□□□□ 0.83
Q3U1D9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Q3U1D9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q3U1D9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q3U1D9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q3U1D9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Q3U1D9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q3U1D9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Q3U1D9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q3U1D9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q3U1D9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q3U1D9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q3U1D9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q3U1D9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q3U1D9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Q3U1D9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q3U1D9 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.23■□□□□ 0.83
Q3U1D9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.22■□□□□ 0.83
Q3U1D9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q3U1D9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q3U1D9 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.22■□□□□ 0.83
Q3U1D9 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.22■□□□□ 0.83
Q3U1D9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q3U1D9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.21■□□□□ 0.83
Q3U1D9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.21■□□□□ 0.83
Q3U1D9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q3U1D9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q3U1D9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Q3U1D9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.21■□□□□ 0.83
Q3U1D9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q3U1D9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q3U1D9 Gm16437-201ENSMUST00000025669 507 ntBASIC20.19■□□□□ 0.82
Q3U1D9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q3U1D9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Q3U1D9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q3U1D9 Amer2-203ENSMUST00000225247 2662 ntBASIC20.19■□□□□ 0.82
Q3U1D9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q3U1D9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q3U1D9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Q3U1D9 Cap2-205ENSMUST00000225824 1634 ntBASIC20.17■□□□□ 0.82
Q3U1D9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q3U1D9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.17■□□□□ 0.82
Q3U1D9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.17■□□□□ 0.82
Q3U1D9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Q3U1D9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.16■□□□□ 0.82
Q3U1D9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.14■□□□□ 0.81
Q3U1D9 Gm9812-201ENSMUST00000061934 968 ntBASIC20.14■□□□□ 0.81
Q3U1D9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Q3U1D9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.14■□□□□ 0.81
Q3U1D9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q3U1D9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q3U1D9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q3U1D9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q3U1D9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.11■□□□□ 0.81
Q3U1D9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q3U1D9 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.1■□□□□ 0.81
Q3U1D9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.1■□□□□ 0.81
Q3U1D9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q3U1D9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q3U1D9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q3U1D9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q3U1D9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Q3U1D9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Q3U1D9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q3U1D9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.08■□□□□ 0.81
Q3U1D9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Q3U1D9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q3U1D9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q3U1D9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Q3U1D9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.08■□□□□ 0.8
Q3U1D9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.07■□□□□ 0.8
Q3U1D9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q3U1D9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Q3U1D9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q3U1D9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Q3U1D9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.07■□□□□ 0.8
Q3U1D9 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.06■□□□□ 0.8
Q3U1D9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q3U1D9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q3U1D9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.05■□□□□ 0.8
Q3U1D9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Q3U1D9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q3U1D9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Q3U1D9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Q3U1D9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.04■□□□□ 0.8
Q3U1D9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Q3U1D9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q3U1D9 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms