Protein–RNA interactions for Protein: Q3KPI0

CEACAM21, Carcinoembryonic antigen-related cell adhesion molecule 21, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM21Q3KPI0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CEACAM21Q3KPI0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.71■■□□□ 1.07
CEACAM21Q3KPI0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CEACAM21Q3KPI0 LINC01003-201ENST00000564834 1764 ntBASIC21.7■■□□□ 1.06
CEACAM21Q3KPI0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CEACAM21Q3KPI0 DUX4L29-201ENST00000425409 679 ntBASIC21.7■■□□□ 1.06
CEACAM21Q3KPI0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CEACAM21Q3KPI0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CEACAM21Q3KPI0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.69■■□□□ 1.06
CEACAM21Q3KPI0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CEACAM21Q3KPI0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CEACAM21Q3KPI0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CEACAM21Q3KPI0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.69■■□□□ 1.06
CEACAM21Q3KPI0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CEACAM21Q3KPI0 RPS2P35-201ENST00000443417 897 ntBASIC21.68■■□□□ 1.06
CEACAM21Q3KPI0 AC021231.2-201ENST00000594613 730 ntBASIC21.68■■□□□ 1.06
CEACAM21Q3KPI0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.68■■□□□ 1.06
CEACAM21Q3KPI0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CEACAM21Q3KPI0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CEACAM21Q3KPI0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CEACAM21Q3KPI0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CEACAM21Q3KPI0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CEACAM21Q3KPI0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CEACAM21Q3KPI0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CEACAM21Q3KPI0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CEACAM21Q3KPI0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CEACAM21Q3KPI0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CEACAM21Q3KPI0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CEACAM21Q3KPI0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.65■■□□□ 1.06
CEACAM21Q3KPI0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CEACAM21Q3KPI0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CEACAM21Q3KPI0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CEACAM21Q3KPI0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CEACAM21Q3KPI0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CEACAM21Q3KPI0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CEACAM21Q3KPI0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CEACAM21Q3KPI0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.63■■□□□ 1.05
CEACAM21Q3KPI0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CEACAM21Q3KPI0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CEACAM21Q3KPI0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CEACAM21Q3KPI0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CEACAM21Q3KPI0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CEACAM21Q3KPI0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CEACAM21Q3KPI0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CEACAM21Q3KPI0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CEACAM21Q3KPI0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.61■■□□□ 1.05
CEACAM21Q3KPI0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.61■■□□□ 1.05
CEACAM21Q3KPI0 AC018358.1-201ENST00000631079 1402 ntBASIC21.61■■□□□ 1.05
CEACAM21Q3KPI0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CEACAM21Q3KPI0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CEACAM21Q3KPI0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CEACAM21Q3KPI0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CEACAM21Q3KPI0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.6■■□□□ 1.05
CEACAM21Q3KPI0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CEACAM21Q3KPI0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CEACAM21Q3KPI0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CEACAM21Q3KPI0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CEACAM21Q3KPI0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
CEACAM21Q3KPI0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CEACAM21Q3KPI0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CEACAM21Q3KPI0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CEACAM21Q3KPI0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CEACAM21Q3KPI0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CEACAM21Q3KPI0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CEACAM21Q3KPI0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CEACAM21Q3KPI0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CEACAM21Q3KPI0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.56■■□□□ 1.04
CEACAM21Q3KPI0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.56■■□□□ 1.04
CEACAM21Q3KPI0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CEACAM21Q3KPI0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CEACAM21Q3KPI0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CEACAM21Q3KPI0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CEACAM21Q3KPI0 AL121749.1-202ENST00000609313 2153 ntBASIC21.55■■□□□ 1.04
CEACAM21Q3KPI0 AC110285.7-201ENST00000624417 1536 ntBASIC21.55■■□□□ 1.04
CEACAM21Q3KPI0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CEACAM21Q3KPI0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CEACAM21Q3KPI0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CEACAM21Q3KPI0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.54■■□□□ 1.04
CEACAM21Q3KPI0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.54■■□□□ 1.04
CEACAM21Q3KPI0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.54■■□□□ 1.04
CEACAM21Q3KPI0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.54■■□□□ 1.04
CEACAM21Q3KPI0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CEACAM21Q3KPI0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CEACAM21Q3KPI0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.54■■□□□ 1.04
CEACAM21Q3KPI0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
CEACAM21Q3KPI0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
CEACAM21Q3KPI0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CEACAM21Q3KPI0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CEACAM21Q3KPI0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CEACAM21Q3KPI0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CEACAM21Q3KPI0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CEACAM21Q3KPI0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CEACAM21Q3KPI0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CEACAM21Q3KPI0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CEACAM21Q3KPI0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.5■■□□□ 1.03
CEACAM21Q3KPI0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CEACAM21Q3KPI0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.5■■□□□ 1.03
CEACAM21Q3KPI0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CEACAM21Q3KPI0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CEACAM21Q3KPI0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms