Protein–RNA interactions for Protein: Q3B7S5

SMIM21, Small integral membrane protein 21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM21Q3B7S5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.42■■□□□ 1.02
SMIM21Q3B7S5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.42■■□□□ 1.02
SMIM21Q3B7S5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.42■■□□□ 1.02
SMIM21Q3B7S5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM21Q3B7S5 AP002414.2-202ENST00000590929 1450 ntBASIC21.41■■□□□ 1.02
SMIM21Q3B7S5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SMIM21Q3B7S5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM21Q3B7S5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.41■■□□□ 1.02
SMIM21Q3B7S5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM21Q3B7S5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM21Q3B7S5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM21Q3B7S5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SMIM21Q3B7S5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.39■■□□□ 1.01
SMIM21Q3B7S5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMIM21Q3B7S5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SMIM21Q3B7S5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SMIM21Q3B7S5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.38■■□□□ 1.01
SMIM21Q3B7S5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM21Q3B7S5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM21Q3B7S5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SMIM21Q3B7S5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM21Q3B7S5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.37■■□□□ 1.01
SMIM21Q3B7S5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMIM21Q3B7S5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMIM21Q3B7S5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMIM21Q3B7S5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.36■■□□□ 1.01
SMIM21Q3B7S5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMIM21Q3B7S5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SMIM21Q3B7S5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM21Q3B7S5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMIM21Q3B7S5 LINC01971-201ENST00000617888 1048 ntBASIC21.35■■□□□ 1.01
SMIM21Q3B7S5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM21Q3B7S5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.34■■□□□ 1.01
SMIM21Q3B7S5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM21Q3B7S5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM21Q3B7S5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM21Q3B7S5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMIM21Q3B7S5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMIM21Q3B7S5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SMIM21Q3B7S5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMIM21Q3B7S5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SMIM21Q3B7S5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SMIM21Q3B7S5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SMIM21Q3B7S5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.33■■□□□ 1
SMIM21Q3B7S5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SMIM21Q3B7S5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.31■■□□□ 1
SMIM21Q3B7S5 BX255925.1-201ENST00000566954 1854 ntBASIC21.31■■□□□ 1
SMIM21Q3B7S5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.31■■□□□ 1
SMIM21Q3B7S5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.31■■□□□ 1
SMIM21Q3B7S5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
SMIM21Q3B7S5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SMIM21Q3B7S5 AC110285.7-201ENST00000624417 1536 ntBASIC21.3■■□□□ 1
SMIM21Q3B7S5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.3■■□□□ 1
SMIM21Q3B7S5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SMIM21Q3B7S5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.29■■□□□ 1
SMIM21Q3B7S5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.29■■□□□ 1
SMIM21Q3B7S5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.29■■□□□ 1
SMIM21Q3B7S5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.28■■□□□ 1
SMIM21Q3B7S5 LINC01003-201ENST00000564834 1764 ntBASIC21.28■■□□□ 1
SMIM21Q3B7S5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM21Q3B7S5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM21Q3B7S5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMIM21Q3B7S5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.28■■□□□ 1
SMIM21Q3B7S5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.28■■□□□ 1
SMIM21Q3B7S5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.28■■□□□ 1
SMIM21Q3B7S5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.28■■□□□ 1
SMIM21Q3B7S5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.27■■□□□ 1
SMIM21Q3B7S5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM21Q3B7S5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMIM21Q3B7S5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SMIM21Q3B7S5 AC018358.1-201ENST00000631079 1402 ntBASIC21.27■■□□□ 1
SMIM21Q3B7S5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.26■□□□□ 0.99
SMIM21Q3B7S5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM21Q3B7S5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMIM21Q3B7S5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM21Q3B7S5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMIM21Q3B7S5 ZNRF2P2-203ENST00000454624 420 ntBASIC21.25■□□□□ 0.99
SMIM21Q3B7S5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM21Q3B7S5 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.24■□□□□ 0.99
SMIM21Q3B7S5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SMIM21Q3B7S5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM21Q3B7S5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM21Q3B7S5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SMIM21Q3B7S5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SMIM21Q3B7S5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.23■□□□□ 0.99
SMIM21Q3B7S5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM21Q3B7S5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM21Q3B7S5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM21Q3B7S5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.22■□□□□ 0.99
SMIM21Q3B7S5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM21Q3B7S5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM21Q3B7S5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM21Q3B7S5 ABHD17AP4-201ENST00000411545 909 ntBASIC21.21■□□□□ 0.99
SMIM21Q3B7S5 DUX4L13-201ENST00000554103 1267 ntBASIC21.21■□□□□ 0.99
SMIM21Q3B7S5 DUX4L15-201ENST00000611059 1267 ntBASIC21.21■□□□□ 0.99
SMIM21Q3B7S5 DUX4L11-201ENST00000611504 1267 ntBASIC21.21■□□□□ 0.99
SMIM21Q3B7S5 DUX4L12-201ENST00000614593 1267 ntBASIC21.21■□□□□ 0.99
SMIM21Q3B7S5 DUX4L23-201ENST00000615195 1269 ntBASIC21.21■□□□□ 0.99
SMIM21Q3B7S5 DUX4L24-201ENST00000617576 1269 ntBASIC21.21■□□□□ 0.99
SMIM21Q3B7S5 DUX4L22-201ENST00000618238 1269 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms