Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHROOM1Q2M3G4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHROOM1Q2M3G4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
SHROOM1Q2M3G4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHROOM1Q2M3G4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
SHROOM1Q2M3G4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SHROOM1Q2M3G4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SHROOM1Q2M3G4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.09■■■□□ 2.41
SHROOM1Q2M3G4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.09■■■□□ 2.41
SHROOM1Q2M3G4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
SHROOM1Q2M3G4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.08■■■□□ 2.41
SHROOM1Q2M3G4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
SHROOM1Q2M3G4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SHROOM1Q2M3G4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SHROOM1Q2M3G4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SHROOM1Q2M3G4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SHROOM1Q2M3G4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.07■■■□□ 2.4
SHROOM1Q2M3G4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
SHROOM1Q2M3G4 ABHD17AP5-201ENST00000580133 923 ntBASIC30.06■■■□□ 2.4
SHROOM1Q2M3G4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SHROOM1Q2M3G4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.05■■■□□ 2.4
SHROOM1Q2M3G4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.05■■■□□ 2.4
SHROOM1Q2M3G4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SHROOM1Q2M3G4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SHROOM1Q2M3G4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
SHROOM1Q2M3G4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SHROOM1Q2M3G4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.04■■■□□ 2.4
SHROOM1Q2M3G4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SHROOM1Q2M3G4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.03■■■□□ 2.4
SHROOM1Q2M3G4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SHROOM1Q2M3G4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SHROOM1Q2M3G4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.02■■■□□ 2.4
SHROOM1Q2M3G4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
SHROOM1Q2M3G4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SHROOM1Q2M3G4 MIR219A2-201ENST00000608502 1504 ntBASIC30.01■■■□□ 2.4
SHROOM1Q2M3G4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.4
SHROOM1Q2M3G4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SHROOM1Q2M3G4 AC148477.6-201ENST00000623746 465 ntBASIC30.01■■■□□ 2.39
SHROOM1Q2M3G4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
SHROOM1Q2M3G4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30■■■□□ 2.39
SHROOM1Q2M3G4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
SHROOM1Q2M3G4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SHROOM1Q2M3G4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SHROOM1Q2M3G4 AC100797.4-201ENST00000631653 1827 ntBASIC29.99■■■□□ 2.39
SHROOM1Q2M3G4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SHROOM1Q2M3G4 AC060814.1-201ENST00000554326 538 ntBASIC29.98■■■□□ 2.39
SHROOM1Q2M3G4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.98■■■□□ 2.39
SHROOM1Q2M3G4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SHROOM1Q2M3G4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SHROOM1Q2M3G4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
SHROOM1Q2M3G4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
SHROOM1Q2M3G4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.96■■■□□ 2.39
SHROOM1Q2M3G4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SHROOM1Q2M3G4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SHROOM1Q2M3G4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.94■■■□□ 2.38
SHROOM1Q2M3G4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
SHROOM1Q2M3G4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
SHROOM1Q2M3G4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.93■■■□□ 2.38
SHROOM1Q2M3G4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM1Q2M3G4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
SHROOM1Q2M3G4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.93■■■□□ 2.38
SHROOM1Q2M3G4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM1Q2M3G4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
SHROOM1Q2M3G4 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.92■■■□□ 2.38
SHROOM1Q2M3G4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SHROOM1Q2M3G4 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.92■■■□□ 2.38
SHROOM1Q2M3G4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
SHROOM1Q2M3G4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.92■■■□□ 2.38
SHROOM1Q2M3G4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SHROOM1Q2M3G4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.91■■■□□ 2.38
SHROOM1Q2M3G4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.9■■■□□ 2.38
SHROOM1Q2M3G4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SHROOM1Q2M3G4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SHROOM1Q2M3G4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
SHROOM1Q2M3G4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.89■■■□□ 2.37
SHROOM1Q2M3G4 ABCB10P1-201ENST00000614297 2181 ntBASIC29.87■■■□□ 2.37
SHROOM1Q2M3G4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
SHROOM1Q2M3G4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.86■■■□□ 2.37
SHROOM1Q2M3G4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SHROOM1Q2M3G4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.86■■■□□ 2.37
SHROOM1Q2M3G4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.86■■■□□ 2.37
SHROOM1Q2M3G4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
SHROOM1Q2M3G4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SHROOM1Q2M3G4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
SHROOM1Q2M3G4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SHROOM1Q2M3G4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.85■■■□□ 2.37
SHROOM1Q2M3G4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.84■■■□□ 2.37
SHROOM1Q2M3G4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
SHROOM1Q2M3G4 AL139393.2-201ENST00000608721 2025 ntBASIC29.84■■■□□ 2.37
SHROOM1Q2M3G4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.83■■■□□ 2.37
SHROOM1Q2M3G4 NTF6A-201ENST00000591175 560 ntBASIC29.83■■■□□ 2.37
SHROOM1Q2M3G4 AP004833.2-201ENST00000532228 1454 ntBASIC29.82■■■□□ 2.36
SHROOM1Q2M3G4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
SHROOM1Q2M3G4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
SHROOM1Q2M3G4 AC092296.2-201ENST00000589470 999 ntBASIC29.81■■■□□ 2.36
SHROOM1Q2M3G4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
SHROOM1Q2M3G4 U85056.1-201ENST00000616429 682 ntBASIC29.8■■■□□ 2.36
SHROOM1Q2M3G4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
SHROOM1Q2M3G4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.79■■■□□ 2.36
SHROOM1Q2M3G4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms