Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 tD(GUC)J2tD(GUC)J2 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)J3tD(GUC)J3 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)J4tD(GUC)J4 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)KtD(GUC)K 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)L1tD(GUC)L1 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)L2tD(GUC)L2 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)MtD(GUC)M 72 nt7.84□□□□□ -1.15
CLP1Q08685 tD(GUC)OtD(GUC)O 72 nt7.84□□□□□ -1.15
CLP1Q08685 PUP3YER094C 618 nt7.84□□□□□ -1.15
CLP1Q08685 AFG2YLR397C 2343 nt7.84□□□□□ -1.15
CLP1Q08685 MSB3YNL293W 1902 nt7.84□□□□□ -1.16
CLP1Q08685 PRE10YOR362C 867 nt7.83□□□□□ -1.16
CLP1Q08685 YHR131CYHR131C 2553 nt7.8□□□□□ -1.16
CLP1Q08685 DAL7YIR031C 1665 nt7.8□□□□□ -1.16
CLP1Q08685 MIM1YOL026C 342 nt7.8□□□□□ -1.16
CLP1Q08685 TRP2YER090W 1524 nt7.79□□□□□ -1.16
CLP1Q08685 YHL030W-AYHL030W-A 462 nt7.79□□□□□ -1.16
CLP1Q08685 YLR358CYLR358C 564 nt7.79□□□□□ -1.16
CLP1Q08685 ADH6YMR318C 1083 nt7.78□□□□□ -1.16
CLP1Q08685 CIR2YOR356W 1896 nt7.77□□□□□ -1.17
CLP1Q08685 PSP2YML017W 1782 nt7.77□□□□□ -1.17
CLP1Q08685 AAT1YKL106W 1356 nt7.77□□□□□ -1.17
CLP1Q08685 RRT6YGL146C 936 nt7.77□□□□□ -1.17
CLP1Q08685 HBS1YKR084C 1836 nt7.77□□□□□ -1.17
CLP1Q08685 HXT11YOL156W 1704 nt7.77□□□□□ -1.17
CLP1Q08685 JHD1YER051W 1479 nt7.76□□□□□ -1.17
CLP1Q08685 MEP1YGR121C 1479 nt7.76□□□□□ -1.17
CLP1Q08685 SHC1YER096W 1539 nt7.76□□□□□ -1.17
CLP1Q08685 HAC1YFL031W 717 nt7.75□□□□□ -1.17
CLP1Q08685 YGR137WYGR137W 375 nt7.75□□□□□ -1.17
CLP1Q08685 TIM50YPL063W 1431 nt7.75□□□□□ -1.17
CLP1Q08685 YPL247CYPL247C 1572 nt7.75□□□□□ -1.17
CLP1Q08685 YBR056WYBR056W 1506 nt7.74□□□□□ -1.17
CLP1Q08685 HXT13YEL069C 1695 nt7.74□□□□□ -1.17
CLP1Q08685 YEN1YER041W 2280 nt7.74□□□□□ -1.17
CLP1Q08685 NMD5YJR132W 3147 nt7.73□□□□□ -1.17
CLP1Q08685 ASN2YGR124W 1719 nt7.72□□□□□ -1.17
CLP1Q08685 RCF1YML030W 480 nt7.72□□□□□ -1.17
CLP1Q08685 CPT1YNL130C 1182 nt7.72□□□□□ -1.17
CLP1Q08685 SPR1YOR190W 1338 nt7.72□□□□□ -1.17
CLP1Q08685 PNS1YOR161C 1620 nt7.71□□□□□ -1.17
CLP1Q08685 SRM1YGL097W 1449 nt7.71□□□□□ -1.17
CLP1Q08685 snR86snR86 1004 nt7.71□□□□□ -1.18
CLP1Q08685 YML079WYML079W 606 nt7.71□□□□□ -1.18
CLP1Q08685 UBP13YBL067C 2244 nt7.71□□□□□ -1.18
CLP1Q08685 EHT1YBR177C 1356 nt7.7□□□□□ -1.18
CLP1Q08685 COS10YNR075W 1125 nt7.69□□□□□ -1.18
CLP1Q08685 PRP2YNR011C 2631 nt7.69□□□□□ -1.18
CLP1Q08685 YLR072WYLR072W 2082 nt7.69□□□□□ -1.18
CLP1Q08685 NDE2YDL085W 1638 nt7.68□□□□□ -1.18
CLP1Q08685 ORT1YOR130C 879 nt7.68□□□□□ -1.18
CLP1Q08685 YNL040WYNL040W 1371 nt7.68□□□□□ -1.18
CLP1Q08685 HXT8YJL214W 1710 nt7.67□□□□□ -1.18
CLP1Q08685 TOS2YGR221C 1869 nt7.67□□□□□ -1.18
CLP1Q08685 ARG7YMR062C 1326 nt7.67□□□□□ -1.18
CLP1Q08685 YOS9YDR057W 1629 nt7.67□□□□□ -1.18
CLP1Q08685 ADE17YMR120C 1779 nt7.66□□□□□ -1.18
CLP1Q08685 APT1YML022W 564 nt7.66□□□□□ -1.18
CLP1Q08685 RPR1RPR1 369 nt7.66□□□□□ -1.18
CLP1Q08685 MNN9YPL050C 1188 nt7.66□□□□□ -1.18
CLP1Q08685 LRO1YNR008W 1986 nt7.66□□□□□ -1.18
CLP1Q08685 DUS3YLR401C 2007 nt7.66□□□□□ -1.18
CLP1Q08685 INO1YJL153C 1602 nt7.65□□□□□ -1.18
CLP1Q08685 DPH5YLR172C 903 nt7.65□□□□□ -1.18
CLP1Q08685 WSC3YOL105C 1671 nt7.64□□□□□ -1.19
CLP1Q08685 AIM34YMR003W 597 nt7.64□□□□□ -1.19
CLP1Q08685 TOP3YLR234W 1971 nt7.64□□□□□ -1.19
CLP1Q08685 HSM3YBR272C 1443 nt7.63□□□□□ -1.19
CLP1Q08685 FTH1YBR207W 1398 nt7.63□□□□□ -1.19
CLP1Q08685 snR4snR4 186 nt7.63□□□□□ -1.19
CLP1Q08685 YRF1-3YGR296W 5580 nt7.62□□□□□ -1.19
CLP1Q08685 YRF1-6YNL339C 5580 nt7.62□□□□□ -1.19
CLP1Q08685 YRF1-7YPL283C 5580 nt7.62□□□□□ -1.19
CLP1Q08685 PUP2YGR253C 783 nt7.62□□□□□ -1.19
CLP1Q08685 MAS2YHR024C 1449 nt7.61□□□□□ -1.19
CLP1Q08685 ATO2YNR002C 849 nt7.6□□□□□ -1.19
CLP1Q08685 CDC13YDL220C 2775 nt7.59□□□□□ -1.19
CLP1Q08685 BUD31YCR063W 474 nt7.59□□□□□ -1.19
CLP1Q08685 STS1YIR011C 960 nt7.59□□□□□ -1.19
CLP1Q08685 YAL019W-AYAL019W-A 570 nt7.59□□□□□ -1.19
CLP1Q08685 TDA4YJR116W 840 nt7.59□□□□□ -1.19
CLP1Q08685 YIL177CYIL177C 5277 nt7.59□□□□□ -1.19
CLP1Q08685 YBL111CYBL111C 2004 nt7.58□□□□□ -1.2
CLP1Q08685 BIM1YER016W 1035 nt7.58□□□□□ -1.2
CLP1Q08685 NCA3YJL116C 1014 nt7.58□□□□□ -1.2
CLP1Q08685 URA1YKL216W 945 nt7.58□□□□□ -1.2
CLP1Q08685 CHA1YCL064C 1083 nt7.57□□□□□ -1.2
CLP1Q08685 YIP4YGL198W 708 nt7.57□□□□□ -1.2
CLP1Q08685 LEA1YPL213W 717 nt7.57□□□□□ -1.2
CLP1Q08685 HIS3YOR202W 663 nt7.56□□□□□ -1.2
CLP1Q08685 LAT1YNL071W 1449 nt7.55□□□□□ -1.2
CLP1Q08685 MGM101YJR144W 810 nt7.55□□□□□ -1.2
CLP1Q08685 MRP7YNL005C 1116 nt7.55□□□□□ -1.2
CLP1Q08685 ABP1YCR088W 1779 nt7.55□□□□□ -1.2
CLP1Q08685 SLM3YDL033C 1254 nt7.54□□□□□ -1.2
CLP1Q08685 SNP1YIL061C 903 nt7.54□□□□□ -1.2
CLP1Q08685 TES1YJR019C 1050 nt7.54□□□□□ -1.2
CLP1Q08685 YOX1YML027W 1158 nt7.54□□□□□ -1.2
CLP1Q08685 Q0010Q0010 387 nt7.54□□□□□ -1.2
CLP1Q08685 TGL5YOR081C 2250 nt7.54□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 22.6 ms