Protein–RNA interactions for Protein: Q06147

LCB5, Sphingoid long chain base kinase 5, yeastyeast

Known RBP Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB5Q06147 PEX12YMR026C 1200 nt8.81□□□□□ -1
LCB5Q06147 RSF1YMR030W 1131 nt8.81□□□□□ -1
LCB5Q06147 SNX3YOR357C 489 nt8.81□□□□□ -1
LCB5Q06147 NCE102YPR149W 522 nt8.81□□□□□ -1
LCB5Q06147 YLH47YPR125W 1365 nt8.81□□□□□ -1
LCB5Q06147 YEA4YEL004W 1029 nt8.8□□□□□ -1
LCB5Q06147 SPS100YHR139C 981 nt8.8□□□□□ -1
LCB5Q06147 RPN8YOR261C 1017 nt8.8□□□□□ -1
LCB5Q06147 TFB4YPR056W 1017 nt8.8□□□□□ -1
LCB5Q06147 SHE9YDR393W 1371 nt8.8□□□□□ -1
LCB5Q06147 MMS21YEL019C 804 nt8.79□□□□□ -1
LCB5Q06147 END3YNL084C 1050 nt8.79□□□□□ -1
LCB5Q06147 ORT1YOR130C 879 nt8.79□□□□□ -1
LCB5Q06147 LYS12YIL094C 1116 nt8.78□□□□□ -1
LCB5Q06147 YPR027CYPR027C 834 nt8.78□□□□□ -1
LCB5Q06147 POP2YNR052C 1302 nt8.78□□□□□ -1
LCB5Q06147 RTG3YBL103C 1461 nt8.77□□□□□ -1
LCB5Q06147 YDR455CYDR455C 309 nt8.77□□□□□ -1.01
LCB5Q06147 PEX22YAL055W 543 nt8.77□□□□□ -1.01
LCB5Q06147 TVP38YKR088C 1014 nt8.77□□□□□ -1.01
LCB5Q06147 ASP3-1YLR155C 1089 nt8.77□□□□□ -1.01
LCB5Q06147 ASP3-2YLR157C 1089 nt8.77□□□□□ -1.01
LCB5Q06147 ASP3-3YLR158C 1089 nt8.77□□□□□ -1.01
LCB5Q06147 ASP3-4YLR160C 1089 nt8.77□□□□□ -1.01
LCB5Q06147 NMD4YLR363C 657 nt8.77□□□□□ -1.01
LCB5Q06147 VAM3YOR106W 852 nt8.77□□□□□ -1.01
LCB5Q06147 RFC1YOR217W 2586 nt8.76□□□□□ -1.01
LCB5Q06147 YAP6YDR259C 1152 nt8.76□□□□□ -1.01
LCB5Q06147 RPN9YDR427W 1182 nt8.76□□□□□ -1.01
LCB5Q06147 YER147C-AYER147C-A 411 nt8.76□□□□□ -1.01
LCB5Q06147 IGD1YFR017C 588 nt8.76□□□□□ -1.01
LCB5Q06147 YHR022CYHR022C 771 nt8.76□□□□□ -1.01
LCB5Q06147 YLR198CYLR198C 360 nt8.76□□□□□ -1.01
LCB5Q06147 RIB1YBL033C 1038 nt8.76□□□□□ -1.01
LCB5Q06147 CSL4YNL232W 879 nt8.76□□□□□ -1.01
LCB5Q06147 RRT8YOL048C 1029 nt8.76□□□□□ -1.01
LCB5Q06147 TRP2YER090W 1524 nt8.75□□□□□ -1.01
LCB5Q06147 TPN1YGL186C 1740 nt8.75□□□□□ -1.01
LCB5Q06147 ADE8YDR408C 645 nt8.75□□□□□ -1.01
LCB5Q06147 SET6YPL165C 1122 nt8.75□□□□□ -1.01
LCB5Q06147 HXT11YOL156W 1704 nt8.74□□□□□ -1.01
LCB5Q06147 BRL1YHR036W 1416 nt8.74□□□□□ -1.01
LCB5Q06147 tE(CUC)DtE(CUC)D 72 nt8.74□□□□□ -1.01
LCB5Q06147 tE(CUC)ItE(CUC)I 72 nt8.74□□□□□ -1.01
LCB5Q06147 YJR114WYJR114W 393 nt8.74□□□□□ -1.01
LCB5Q06147 TAP42YMR028W 1101 nt8.74□□□□□ -1.01
LCB5Q06147 RTC4YNL254C 1206 nt8.74□□□□□ -1.01
LCB5Q06147 ATG29YPL166W 642 nt8.74□□□□□ -1.01
LCB5Q06147 POP4YBR257W 840 nt8.74□□□□□ -1.01
LCB5Q06147 snR4snR4 186 nt8.74□□□□□ -1.01
LCB5Q06147 ADE16YLR028C 1776 nt8.73□□□□□ -1.01
LCB5Q06147 ALR1YOL130W 2580 nt8.73□□□□□ -1.01
LCB5Q06147 YFR036W-AYFR036W-A 651 nt8.73□□□□□ -1.01
LCB5Q06147 ERJ5YFR041C 888 nt8.73□□□□□ -1.01
LCB5Q06147 YFR045WYFR045W 930 nt8.73□□□□□ -1.01
LCB5Q06147 FSH1YHR049W 732 nt8.73□□□□□ -1.01
LCB5Q06147 YIA6YIL006W 1122 nt8.73□□□□□ -1.01
LCB5Q06147 JJJ3YJR097W 519 nt8.73□□□□□ -1.01
LCB5Q06147 KRE1YNL322C 942 nt8.73□□□□□ -1.01
LCB5Q06147 DTR1YBR180W 1719 nt8.73□□□□□ -1.01
LCB5Q06147 FHN1YGR131W 525 nt8.72□□□□□ -1.01
LCB5Q06147 DSC2YOL073C 969 nt8.72□□□□□ -1.01
LCB5Q06147 RXT2YBR095C 1293 nt8.72□□□□□ -1.01
LCB5Q06147 THI6YPL214C 1623 nt8.72□□□□□ -1.01
LCB5Q06147 ERG13YML126C 1476 nt8.71□□□□□ -1.01
LCB5Q06147 YCP4YCR004C 744 nt8.71□□□□□ -1.02
LCB5Q06147 YDR467CYDR467C 327 nt8.71□□□□□ -1.02
LCB5Q06147 NDL1YLR254C 570 nt8.71□□□□□ -1.02
LCB5Q06147 IDP3YNL009W 1263 nt8.71□□□□□ -1.02
LCB5Q06147 SIR2YDL042C 1689 nt8.7□□□□□ -1.02
LCB5Q06147 RRP1YDR087C 837 nt8.7□□□□□ -1.02
LCB5Q06147 RRT6YGL146C 936 nt8.7□□□□□ -1.02
LCB5Q06147 ISA2YPR067W 558 nt8.7□□□□□ -1.02
LCB5Q06147 YCR025CYCR025C 411 nt8.69□□□□□ -1.02
LCB5Q06147 SOD2YHR008C 702 nt8.69□□□□□ -1.02
LCB5Q06147 MIX17YMR002W 471 nt8.69□□□□□ -1.02
LCB5Q06147 YPL068CYPL068C 882 nt8.69□□□□□ -1.02
LCB5Q06147 COX11YPL132W 903 nt8.69□□□□□ -1.02
LCB5Q06147 MGR3YMR115W 1506 nt8.69□□□□□ -1.02
LCB5Q06147 TVP23YDR084C 600 nt8.68□□□□□ -1.02
LCB5Q06147 YAL026C-AYAL026C-A 438 nt8.68□□□□□ -1.02
LCB5Q06147 YMR075C-AYMR075C-A 366 nt8.68□□□□□ -1.02
LCB5Q06147 YMR181CYMR181C 465 nt8.68□□□□□ -1.02
LCB5Q06147 MET30YIL046W 1923 nt8.68□□□□□ -1.02
LCB5Q06147 tA(AGC)DtA(AGC)D 73 nt8.67□□□□□ -1.02
LCB5Q06147 tA(AGC)FtA(AGC)F 73 nt8.67□□□□□ -1.02
LCB5Q06147 tA(AGC)GtA(AGC)G 73 nt8.67□□□□□ -1.02
LCB5Q06147 tA(AGC)HtA(AGC)H 73 nt8.67□□□□□ -1.02
LCB5Q06147 tA(AGC)JtA(AGC)J 73 nt8.67□□□□□ -1.02
LCB5Q06147 tA(AGC)K1tA(AGC)K1 73 nt8.67□□□□□ -1.02
LCB5Q06147 tA(AGC)K2tA(AGC)K2 73 nt8.67□□□□□ -1.02
LCB5Q06147 tA(AGC)LtA(AGC)L 73 nt8.67□□□□□ -1.02
LCB5Q06147 tA(AGC)M1tA(AGC)M1 73 nt8.67□□□□□ -1.02
LCB5Q06147 tA(AGC)M2tA(AGC)M2 73 nt8.67□□□□□ -1.02
LCB5Q06147 tA(AGC)PtA(AGC)P 73 nt8.67□□□□□ -1.02
LCB5Q06147 RAI1YGL246C 1164 nt8.67□□□□□ -1.02
LCB5Q06147 MHO1YJR008W 1017 nt8.67□□□□□ -1.02
LCB5Q06147 YLR285C-AYLR285C-A 171 nt8.67□□□□□ -1.02
LCB5Q06147 IPL1YPL209C 1104 nt8.67□□□□□ -1.02
LCB5Q06147 SRM1YGL097W 1449 nt8.66□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 45.2 ms