Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DUX4L29-201ENST00000425409 679 ntBASIC22.23■■□□□ 1.15
HIST1H3AP68431 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.23■■□□□ 1.15
HIST1H3AP68431 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HIST1H3AP68431 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HIST1H3AP68431 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
HIST1H3AP68431 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.22■■□□□ 1.15
HIST1H3AP68431 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST1H3AP68431 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.22■■□□□ 1.15
HIST1H3AP68431 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST1H3AP68431 LINC01003-201ENST00000564834 1764 ntBASIC22.22■■□□□ 1.15
HIST1H3AP68431 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HIST1H3AP68431 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.21■■□□□ 1.15
HIST1H3AP68431 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HIST1H3AP68431 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HIST1H3AP68431 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HIST1H3AP68431 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HIST1H3AP68431 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
HIST1H3AP68431 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST1H3AP68431 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
HIST1H3AP68431 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.19■■□□□ 1.14
HIST1H3AP68431 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST1H3AP68431 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.19■■□□□ 1.14
HIST1H3AP68431 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
HIST1H3AP68431 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
HIST1H3AP68431 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HIST1H3AP68431 AC018358.1-201ENST00000631079 1402 ntBASIC22.18■■□□□ 1.14
HIST1H3AP68431 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HIST1H3AP68431 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
HIST1H3AP68431 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.17■■□□□ 1.14
HIST1H3AP68431 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HIST1H3AP68431 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
HIST1H3AP68431 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.16■■□□□ 1.14
HIST1H3AP68431 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HIST1H3AP68431 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HIST1H3AP68431 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HIST1H3AP68431 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
HIST1H3AP68431 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
HIST1H3AP68431 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HIST1H3AP68431 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HIST1H3AP68431 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.14■■□□□ 1.13
HIST1H3AP68431 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HIST1H3AP68431 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HIST1H3AP68431 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HIST1H3AP68431 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HIST1H3AP68431 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.12■■□□□ 1.13
HIST1H3AP68431 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HIST1H3AP68431 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
HIST1H3AP68431 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
HIST1H3AP68431 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HIST1H3AP68431 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HIST1H3AP68431 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.11■■□□□ 1.13
HIST1H3AP68431 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HIST1H3AP68431 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
HIST1H3AP68431 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HIST1H3AP68431 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
HIST1H3AP68431 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.1■■□□□ 1.13
HIST1H3AP68431 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
HIST1H3AP68431 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.1■■□□□ 1.13
HIST1H3AP68431 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HIST1H3AP68431 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HIST1H3AP68431 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HIST1H3AP68431 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
HIST1H3AP68431 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
HIST1H3AP68431 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HIST1H3AP68431 AC110285.7-201ENST00000624417 1536 ntBASIC22.09■■□□□ 1.13
HIST1H3AP68431 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HIST1H3AP68431 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HIST1H3AP68431 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HIST1H3AP68431 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.08■■□□□ 1.13
HIST1H3AP68431 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.08■■□□□ 1.13
HIST1H3AP68431 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HIST1H3AP68431 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
HIST1H3AP68431 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
HIST1H3AP68431 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HIST1H3AP68431 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
HIST1H3AP68431 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
HIST1H3AP68431 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
HIST1H3AP68431 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.07■■□□□ 1.12
HIST1H3AP68431 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
HIST1H3AP68431 AL121749.1-202ENST00000609313 2153 ntBASIC22.06■■□□□ 1.12
HIST1H3AP68431 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HIST1H3AP68431 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.05■■□□□ 1.12
HIST1H3AP68431 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HIST1H3AP68431 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HIST1H3AP68431 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HIST1H3AP68431 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
HIST1H3AP68431 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
HIST1H3AP68431 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HIST1H3AP68431 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.04■■□□□ 1.12
HIST1H3AP68431 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.04■■□□□ 1.12
HIST1H3AP68431 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HIST1H3AP68431 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HIST1H3AP68431 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HIST1H3AP68431 LINC01971-201ENST00000617888 1048 ntBASIC22.03■■□□□ 1.12
HIST1H3AP68431 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HIST1H3AP68431 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HIST1H3AP68431 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HIST1H3AP68431 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
HIST1H3AP68431 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HIST1H3AP68431 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms