Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm3P62311 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Lsm3P62311 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Lsm3P62311 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Lsm3P62311 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm3P62311 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm3P62311 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm3P62311 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Lsm3P62311 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Lsm3P62311 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm3P62311 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm3P62311 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm3P62311 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Lsm3P62311 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.16■□□□□ 0.98
Lsm3P62311 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm3P62311 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm3P62311 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Lsm3P62311 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lsm3P62311 Gm27322-201ENSMUST00000184007 104 ntBASIC21.15■□□□□ 0.98
Lsm3P62311 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lsm3P62311 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm3P62311 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Lsm3P62311 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm3P62311 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Lsm3P62311 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm3P62311 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm3P62311 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm3P62311 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Lsm3P62311 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm3P62311 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm3P62311 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm3P62311 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm3P62311 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.12■□□□□ 0.97
Lsm3P62311 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm3P62311 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm3P62311 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.12■□□□□ 0.97
Lsm3P62311 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm3P62311 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm3P62311 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm3P62311 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm3P62311 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.11■□□□□ 0.97
Lsm3P62311 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.11■□□□□ 0.97
Lsm3P62311 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm3P62311 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Lsm3P62311 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Lsm3P62311 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm3P62311 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm3P62311 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.09■□□□□ 0.97
Lsm3P62311 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm3P62311 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm3P62311 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Lsm3P62311 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Lsm3P62311 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.09■□□□□ 0.97
Lsm3P62311 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Lsm3P62311 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm3P62311 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm3P62311 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm3P62311 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm3P62311 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm3P62311 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.08■□□□□ 0.97
Lsm3P62311 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm3P62311 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm3P62311 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm3P62311 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm3P62311 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm3P62311 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm3P62311 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm3P62311 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm3P62311 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.05■□□□□ 0.96
Lsm3P62311 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.05■□□□□ 0.96
Lsm3P62311 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm3P62311 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm3P62311 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm3P62311 Peli2-204ENSMUST00000226513 1320 ntBASIC21.04■□□□□ 0.96
Lsm3P62311 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lsm3P62311 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm3P62311 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm3P62311 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm3P62311 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm3P62311 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm3P62311 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm3P62311 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm3P62311 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm3P62311 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm3P62311 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm3P62311 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm3P62311 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm3P62311 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm3P62311 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Lsm3P62311 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
Lsm3P62311 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm3P62311 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm3P62311 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Lsm3P62311 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Lsm3P62311 Gm25262-201ENSMUST00000174934 133 ntBASIC21.01■□□□□ 0.95
Lsm3P62311 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lsm3P62311 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Lsm3P62311 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm3P62311 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lsm3P62311 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms