Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sec61a1P61620 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sec61a1P61620 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Sec61a1P61620 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.22■□□□□ 0.83
Sec61a1P61620 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sec61a1P61620 Gm8503-201ENSMUST00000118131 455 ntBASIC20.22■□□□□ 0.83
Sec61a1P61620 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sec61a1P61620 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sec61a1P61620 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sec61a1P61620 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.21■□□□□ 0.83
Sec61a1P61620 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.21■□□□□ 0.83
Sec61a1P61620 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.21■□□□□ 0.83
Sec61a1P61620 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sec61a1P61620 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.2■□□□□ 0.82
Sec61a1P61620 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sec61a1P61620 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sec61a1P61620 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.2■□□□□ 0.82
Sec61a1P61620 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sec61a1P61620 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sec61a1P61620 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.19■□□□□ 0.82
Sec61a1P61620 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sec61a1P61620 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sec61a1P61620 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sec61a1P61620 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sec61a1P61620 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sec61a1P61620 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sec61a1P61620 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Sec61a1P61620 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sec61a1P61620 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.17■□□□□ 0.82
Sec61a1P61620 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sec61a1P61620 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sec61a1P61620 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sec61a1P61620 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a1P61620 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a1P61620 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Sec61a1P61620 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a1P61620 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a1P61620 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a1P61620 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a1P61620 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sec61a1P61620 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sec61a1P61620 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sec61a1P61620 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sec61a1P61620 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.14■□□□□ 0.82
Sec61a1P61620 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sec61a1P61620 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sec61a1P61620 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.14■□□□□ 0.81
Sec61a1P61620 Nkain2-201ENSMUST00000092602 558 ntBASIC20.14■□□□□ 0.81
Sec61a1P61620 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sec61a1P61620 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sec61a1P61620 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sec61a1P61620 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sec61a1P61620 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Sec61a1P61620 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Sec61a1P61620 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sec61a1P61620 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sec61a1P61620 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Sec61a1P61620 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sec61a1P61620 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sec61a1P61620 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sec61a1P61620 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sec61a1P61620 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sec61a1P61620 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.1■□□□□ 0.81
Sec61a1P61620 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sec61a1P61620 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Sec61a1P61620 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sec61a1P61620 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sec61a1P61620 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Sec61a1P61620 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sec61a1P61620 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sec61a1P61620 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sec61a1P61620 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.07■□□□□ 0.8
Sec61a1P61620 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sec61a1P61620 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sec61a1P61620 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sec61a1P61620 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Sec61a1P61620 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sec61a1P61620 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sec61a1P61620 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sec61a1P61620 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sec61a1P61620 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.05■□□□□ 0.8
Sec61a1P61620 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Sec61a1P61620 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sec61a1P61620 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Sec61a1P61620 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sec61a1P61620 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sec61a1P61620 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.04■□□□□ 0.8
Sec61a1P61620 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.04■□□□□ 0.8
Sec61a1P61620 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sec61a1P61620 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Sec61a1P61620 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.04■□□□□ 0.8
Sec61a1P61620 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sec61a1P61620 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sec61a1P61620 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sec61a1P61620 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.03■□□□□ 0.8
Sec61a1P61620 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sec61a1P61620 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sec61a1P61620 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Sec61a1P61620 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
Sec61a1P61620 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms