Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
UBE2D3P61077 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
UBE2D3P61077 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2D3P61077 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2D3P61077 AC100797.4-201ENST00000631653 1827 ntBASIC17.94■□□□□ 0.46
UBE2D3P61077 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2D3P61077 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2D3P61077 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2D3P61077 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.94■□□□□ 0.46
UBE2D3P61077 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2D3P61077 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2D3P61077 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
UBE2D3P61077 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2D3P61077 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBE2D3P61077 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2D3P61077 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2D3P61077 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2D3P61077 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.92■□□□□ 0.46
UBE2D3P61077 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBE2D3P61077 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2D3P61077 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2D3P61077 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2D3P61077 AC108673.1-201ENST00000510422 1159 ntBASIC17.91■□□□□ 0.46
UBE2D3P61077 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.91■□□□□ 0.46
UBE2D3P61077 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2D3P61077 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.91■□□□□ 0.46
UBE2D3P61077 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
UBE2D3P61077 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2D3P61077 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.9■□□□□ 0.46
UBE2D3P61077 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.9■□□□□ 0.46
UBE2D3P61077 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2D3P61077 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
UBE2D3P61077 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBE2D3P61077 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2D3P61077 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2D3P61077 LINC01003-201ENST00000564834 1764 ntBASIC17.89■□□□□ 0.45
UBE2D3P61077 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2D3P61077 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2D3P61077 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2D3P61077 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2D3P61077 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.88■□□□□ 0.45
UBE2D3P61077 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2D3P61077 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
UBE2D3P61077 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.87■□□□□ 0.45
UBE2D3P61077 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
UBE2D3P61077 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
UBE2D3P61077 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.87■□□□□ 0.45
UBE2D3P61077 AP002414.2-202ENST00000590929 1450 ntBASIC17.87■□□□□ 0.45
UBE2D3P61077 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.86■□□□□ 0.45
UBE2D3P61077 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2D3P61077 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2D3P61077 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2D3P61077 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
UBE2D3P61077 DUX4L28-201ENST00000623687 678 ntBASIC17.86■□□□□ 0.45
UBE2D3P61077 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
UBE2D3P61077 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.86■□□□□ 0.45
UBE2D3P61077 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.85■□□□□ 0.45
UBE2D3P61077 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBE2D3P61077 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UBE2D3P61077 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBE2D3P61077 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.85■□□□□ 0.45
UBE2D3P61077 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.85■□□□□ 0.45
UBE2D3P61077 AC135983.2-203ENST00000454486 1613 ntBASIC17.85■□□□□ 0.45
UBE2D3P61077 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UBE2D3P61077 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.85■□□□□ 0.45
UBE2D3P61077 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
UBE2D3P61077 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBE2D3P61077 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
UBE2D3P61077 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
UBE2D3P61077 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.84■□□□□ 0.45
UBE2D3P61077 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.84■□□□□ 0.45
UBE2D3P61077 MIR3665-201ENST00000578708 105 ntBASIC17.84■□□□□ 0.45
UBE2D3P61077 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBE2D3P61077 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
UBE2D3P61077 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
UBE2D3P61077 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
UBE2D3P61077 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.83■□□□□ 0.45
UBE2D3P61077 MIR6090-201ENST00000622481 60 ntBASIC17.83■□□□□ 0.44
UBE2D3P61077 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.83■□□□□ 0.44
UBE2D3P61077 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBE2D3P61077 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2D3P61077 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2D3P61077 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2D3P61077 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2D3P61077 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2D3P61077 LINC00273-201ENST00000539813 1452 ntBASIC17.8■□□□□ 0.44
UBE2D3P61077 WHAMMP2-203ENST00000563942 1603 ntBASIC17.8■□□□□ 0.44
UBE2D3P61077 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.79■□□□□ 0.44
UBE2D3P61077 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UBE2D3P61077 AP006261.1-201ENST00000584783 668 ntBASIC17.79■□□□□ 0.44
UBE2D3P61077 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2D3P61077 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2D3P61077 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBE2D3P61077 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
UBE2D3P61077 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2D3P61077 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2D3P61077 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2D3P61077 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2D3P61077 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2D3P61077 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms