Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB5BP61020 AC012676.1-201ENST00000574705 1949 ntBASIC20.04■□□□□ 0.8
RAB5BP61020 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB5BP61020 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
RAB5BP61020 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB5BP61020 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.03■□□□□ 0.8
RAB5BP61020 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB5BP61020 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RAB5BP61020 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB5BP61020 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB5BP61020 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RAB5BP61020 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RAB5BP61020 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB5BP61020 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB5BP61020 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20■□□□□ 0.79
RAB5BP61020 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RAB5BP61020 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20■□□□□ 0.79
RAB5BP61020 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RAB5BP61020 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB5BP61020 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB5BP61020 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20■□□□□ 0.79
RAB5BP61020 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB5BP61020 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RAB5BP61020 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB5BP61020 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
RAB5BP61020 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB5BP61020 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB5BP61020 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
RAB5BP61020 AC091060.1-201ENST00000623524 1766 ntBASIC19.98■□□□□ 0.79
RAB5BP61020 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB5BP61020 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB5BP61020 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB5BP61020 BX255925.1-201ENST00000566954 1854 ntBASIC19.96■□□□□ 0.79
RAB5BP61020 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB5BP61020 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
RAB5BP61020 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB5BP61020 CLDN5-201ENST00000403084 2357 ntBASIC19.95■□□□□ 0.78
RAB5BP61020 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RAB5BP61020 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB5BP61020 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB5BP61020 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
RAB5BP61020 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RAB5BP61020 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB5BP61020 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB5BP61020 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB5BP61020 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB5BP61020 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB5BP61020 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB5BP61020 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB5BP61020 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB5BP61020 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB5BP61020 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB5BP61020 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB5BP61020 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB5BP61020 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB5BP61020 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB5BP61020 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RAB5BP61020 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB5BP61020 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.92■□□□□ 0.78
RAB5BP61020 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB5BP61020 AC079834.2-201ENST00000609776 1949 ntBASIC19.91■□□□□ 0.78
RAB5BP61020 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB5BP61020 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RAB5BP61020 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB5BP61020 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB5BP61020 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB5BP61020 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB5BP61020 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB5BP61020 AL139393.2-201ENST00000608721 2025 ntBASIC19.9■□□□□ 0.78
RAB5BP61020 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB5BP61020 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB5BP61020 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB5BP61020 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB5BP61020 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.9■□□□□ 0.78
RAB5BP61020 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB5BP61020 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RAB5BP61020 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB5BP61020 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB5BP61020 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB5BP61020 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.89■□□□□ 0.77
RAB5BP61020 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB5BP61020 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB5BP61020 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB5BP61020 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB5BP61020 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB5BP61020 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB5BP61020 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RAB5BP61020 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RAB5BP61020 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB5BP61020 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB5BP61020 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB5BP61020 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB5BP61020 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB5BP61020 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB5BP61020 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RAB5BP61020 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB5BP61020 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RAB5BP61020 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB5BP61020 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB5BP61020 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms