Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.18■□□□□ 0.98
RIPPLY3P57055 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RIPPLY3P57055 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RIPPLY3P57055 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.18■□□□□ 0.98
RIPPLY3P57055 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RIPPLY3P57055 AC010980.1-201ENST00000587192 1142 ntBASIC21.17■□□□□ 0.98
RIPPLY3P57055 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIPPLY3P57055 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RIPPLY3P57055 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIPPLY3P57055 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RIPPLY3P57055 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.15■□□□□ 0.98
RIPPLY3P57055 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RIPPLY3P57055 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC21.15■□□□□ 0.98
RIPPLY3P57055 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RIPPLY3P57055 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RIPPLY3P57055 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RIPPLY3P57055 AL592293.1-201ENST00000502889 1188 ntBASIC21.13■□□□□ 0.97
RIPPLY3P57055 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIPPLY3P57055 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.12■□□□□ 0.97
RIPPLY3P57055 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RIPPLY3P57055 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RIPPLY3P57055 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RIPPLY3P57055 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIPPLY3P57055 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.11■□□□□ 0.97
RIPPLY3P57055 RARRES2P6-201ENST00000567333 442 ntBASIC21.11■□□□□ 0.97
RIPPLY3P57055 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RIPPLY3P57055 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.09■□□□□ 0.97
RIPPLY3P57055 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RIPPLY3P57055 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RIPPLY3P57055 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIPPLY3P57055 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
RIPPLY3P57055 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.07■□□□□ 0.96
RIPPLY3P57055 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPPLY3P57055 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
RIPPLY3P57055 AC103834.1-201ENST00000520383 144 ntBASIC21.06■□□□□ 0.96
RIPPLY3P57055 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.06■□□□□ 0.96
RIPPLY3P57055 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.06■□□□□ 0.96
RIPPLY3P57055 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPPLY3P57055 AL161658.1-201ENST00000623641 1967 ntBASIC21.06■□□□□ 0.96
RIPPLY3P57055 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPPLY3P57055 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.05■□□□□ 0.96
RIPPLY3P57055 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RIPPLY3P57055 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.04■□□□□ 0.96
RIPPLY3P57055 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.04■□□□□ 0.96
RIPPLY3P57055 AC133552.2-201ENST00000619106 1032 ntBASIC21.04■□□□□ 0.96
RIPPLY3P57055 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPPLY3P57055 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.04■□□□□ 0.96
RIPPLY3P57055 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RIPPLY3P57055 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.03■□□□□ 0.96
RIPPLY3P57055 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
RIPPLY3P57055 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIPPLY3P57055 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIPPLY3P57055 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RIPPLY3P57055 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RIPPLY3P57055 AC139795.1-202ENST00000500444 432 ntBASIC21.01■□□□□ 0.95
RIPPLY3P57055 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RIPPLY3P57055 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.01■□□□□ 0.95
RIPPLY3P57055 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.01■□□□□ 0.95
RIPPLY3P57055 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIPPLY3P57055 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RIPPLY3P57055 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIPPLY3P57055 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RIPPLY3P57055 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21■□□□□ 0.95
RIPPLY3P57055 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RIPPLY3P57055 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.99■□□□□ 0.95
RIPPLY3P57055 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RIPPLY3P57055 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.99■□□□□ 0.95
RIPPLY3P57055 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RIPPLY3P57055 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RIPPLY3P57055 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RIPPLY3P57055 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIPPLY3P57055 AC009831.1-201ENST00000580420 1582 ntBASIC20.98■□□□□ 0.95
RIPPLY3P57055 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.98■□□□□ 0.95
RIPPLY3P57055 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RIPPLY3P57055 AL031848.2-201ENST00000607670 837 ntBASIC20.98■□□□□ 0.95
RIPPLY3P57055 MIR5787-201ENST00000611784 55 ntBASIC20.98■□□□□ 0.95
RIPPLY3P57055 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.97■□□□□ 0.95
RIPPLY3P57055 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RIPPLY3P57055 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.96■□□□□ 0.95
RIPPLY3P57055 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.96■□□□□ 0.95
RIPPLY3P57055 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.96■□□□□ 0.95
RIPPLY3P57055 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
RIPPLY3P57055 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.96■□□□□ 0.95
RIPPLY3P57055 MIR4508-201ENST00000584178 70 ntBASIC20.96■□□□□ 0.95
RIPPLY3P57055 AC007029.1-201ENST00000604183 313 ntBASIC20.96■□□□□ 0.95
RIPPLY3P57055 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
RIPPLY3P57055 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RIPPLY3P57055 AC239859.2-201ENST00000444165 318 ntBASIC20.95■□□□□ 0.94
RIPPLY3P57055 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.95■□□□□ 0.94
RIPPLY3P57055 AC148477.6-201ENST00000623746 465 ntBASIC20.95■□□□□ 0.94
RIPPLY3P57055 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.95■□□□□ 0.94
RIPPLY3P57055 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.95■□□□□ 0.94
RIPPLY3P57055 AC139426.1-201ENST00000568218 2529 ntBASIC20.95■□□□□ 0.94
RIPPLY3P57055 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.94■□□□□ 0.94
RIPPLY3P57055 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPPLY3P57055 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RIPPLY3P57055 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.94■□□□□ 0.94
RIPPLY3P57055 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RIPPLY3P57055 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.94■□□□□ 0.94
RIPPLY3P57055 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms