Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.95■□□□□ 0.94
Cldn18P56857 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn18P56857 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn18P56857 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.94■□□□□ 0.94
Cldn18P56857 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cldn18P56857 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cldn18P56857 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn18P56857 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn18P56857 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn18P56857 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.92■□□□□ 0.94
Cldn18P56857 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn18P56857 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn18P56857 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.91■□□□□ 0.94
Cldn18P56857 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cldn18P56857 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Cldn18P56857 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cldn18P56857 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn18P56857 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn18P56857 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn18P56857 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn18P56857 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cldn18P56857 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn18P56857 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn18P56857 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn18P56857 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn18P56857 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn18P56857 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn18P56857 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn18P56857 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn18P56857 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn18P56857 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Cldn18P56857 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.85■□□□□ 0.93
Cldn18P56857 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn18P56857 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Cldn18P56857 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn18P56857 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn18P56857 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn18P56857 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn18P56857 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn18P56857 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn18P56857 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cldn18P56857 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn18P56857 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn18P56857 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn18P56857 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn18P56857 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn18P56857 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn18P56857 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn18P56857 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn18P56857 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.8■□□□□ 0.92
Cldn18P56857 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn18P56857 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn18P56857 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cldn18P56857 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cldn18P56857 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cldn18P56857 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Cldn18P56857 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cldn18P56857 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cldn18P56857 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cldn18P56857 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn18P56857 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cldn18P56857 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn18P56857 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.75■□□□□ 0.91
Cldn18P56857 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn18P56857 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn18P56857 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cldn18P56857 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cldn18P56857 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cldn18P56857 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cldn18P56857 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.74■□□□□ 0.91
Cldn18P56857 Gm4799-201ENSMUST00000095396 657 ntBASIC20.74■□□□□ 0.91
Cldn18P56857 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn18P56857 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn18P56857 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cldn18P56857 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cldn18P56857 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn18P56857 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cldn18P56857 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.72■□□□□ 0.91
Cldn18P56857 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn18P56857 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cldn18P56857 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.71■□□□□ 0.91
Cldn18P56857 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.71■□□□□ 0.91
Cldn18P56857 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Cldn18P56857 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn18P56857 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn18P56857 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn18P56857 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cldn18P56857 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cldn18P56857 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn18P56857 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cldn18P56857 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.7■□□□□ 0.9
Cldn18P56857 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.7■□□□□ 0.9
Cldn18P56857 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn18P56857 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn18P56857 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.68■□□□□ 0.9
Cldn18P56857 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn18P56857 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.68■□□□□ 0.9
Cldn18P56857 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn18P56857 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn18P56857 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms