Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TMEM50BP56557 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEM50BP56557 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM50BP56557 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM50BP56557 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEM50BP56557 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.52■■□□□ 1.04
TMEM50BP56557 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEM50BP56557 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TMEM50BP56557 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM50BP56557 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEM50BP56557 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM50BP56557 AC097358.2-201ENST00000607541 1159 ntBASIC21.5■■□□□ 1.03
TMEM50BP56557 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TMEM50BP56557 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.5■■□□□ 1.03
TMEM50BP56557 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM50BP56557 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TMEM50BP56557 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM50BP56557 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM50BP56557 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TMEM50BP56557 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM50BP56557 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.48■■□□□ 1.03
TMEM50BP56557 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.48■■□□□ 1.03
TMEM50BP56557 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM50BP56557 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM50BP56557 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.47■■□□□ 1.03
TMEM50BP56557 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM50BP56557 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM50BP56557 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM50BP56557 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.46■■□□□ 1.03
TMEM50BP56557 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.46■■□□□ 1.03
TMEM50BP56557 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TMEM50BP56557 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.45■■□□□ 1.02
TMEM50BP56557 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM50BP56557 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM50BP56557 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM50BP56557 MIR762-201ENST00000390236 83 ntBASIC21.44■■□□□ 1.02
TMEM50BP56557 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM50BP56557 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TMEM50BP56557 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM50BP56557 AL449106.1-201ENST00000608517 1980 ntBASIC21.43■■□□□ 1.02
TMEM50BP56557 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM50BP56557 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.43■■□□□ 1.02
TMEM50BP56557 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM50BP56557 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM50BP56557 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM50BP56557 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.42■■□□□ 1.02
TMEM50BP56557 AC135731.1-201ENST00000569415 2548 ntBASIC21.42■■□□□ 1.02
TMEM50BP56557 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM50BP56557 AC135983.2-203ENST00000454486 1613 ntBASIC21.4■■□□□ 1.02
TMEM50BP56557 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TMEM50BP56557 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.4■■□□□ 1.02
TMEM50BP56557 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TMEM50BP56557 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.4■■□□□ 1.02
TMEM50BP56557 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TMEM50BP56557 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.39■■□□□ 1.02
TMEM50BP56557 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMEM50BP56557 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM50BP56557 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM50BP56557 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
TMEM50BP56557 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM50BP56557 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEM50BP56557 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEM50BP56557 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM50BP56557 AC018358.1-201ENST00000631079 1402 ntBASIC21.38■■□□□ 1.01
TMEM50BP56557 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TMEM50BP56557 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM50BP56557 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.38■■□□□ 1.01
TMEM50BP56557 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TMEM50BP56557 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM50BP56557 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM50BP56557 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TMEM50BP56557 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM50BP56557 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM50BP56557 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TMEM50BP56557 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM50BP56557 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TMEM50BP56557 AC091060.1-201ENST00000623524 1766 ntBASIC21.36■■□□□ 1.01
TMEM50BP56557 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM50BP56557 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM50BP56557 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TMEM50BP56557 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEM50BP56557 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM50BP56557 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TMEM50BP56557 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.35■■□□□ 1.01
TMEM50BP56557 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM50BP56557 WHAMMP2-203ENST00000563942 1603 ntBASIC21.35■■□□□ 1.01
TMEM50BP56557 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM50BP56557 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM50BP56557 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM50BP56557 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM50BP56557 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.34■■□□□ 1.01
TMEM50BP56557 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.34■■□□□ 1.01
TMEM50BP56557 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.34■■□□□ 1.01
TMEM50BP56557 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM50BP56557 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms