Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abcd3P55096 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abcd3P55096 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abcd3P55096 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abcd3P55096 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Abcd3P55096 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcd3P55096 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcd3P55096 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Abcd3P55096 Gm6821-201ENSMUST00000107540 542 ntBASIC20.81■□□□□ 0.92
Abcd3P55096 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Abcd3P55096 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Abcd3P55096 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Abcd3P55096 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcd3P55096 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcd3P55096 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcd3P55096 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcd3P55096 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Abcd3P55096 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.8■□□□□ 0.92
Abcd3P55096 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.8■□□□□ 0.92
Abcd3P55096 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Abcd3P55096 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abcd3P55096 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Abcd3P55096 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Abcd3P55096 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Abcd3P55096 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Abcd3P55096 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.79■□□□□ 0.92
Abcd3P55096 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Abcd3P55096 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abcd3P55096 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abcd3P55096 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.77■□□□□ 0.92
Abcd3P55096 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.77■□□□□ 0.92
Abcd3P55096 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Abcd3P55096 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Abcd3P55096 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Abcd3P55096 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.75■□□□□ 0.91
Abcd3P55096 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Abcd3P55096 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Abcd3P55096 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcd3P55096 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.74■□□□□ 0.91
Abcd3P55096 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Abcd3P55096 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcd3P55096 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcd3P55096 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcd3P55096 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abcd3P55096 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Abcd3P55096 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abcd3P55096 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Abcd3P55096 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Abcd3P55096 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Abcd3P55096 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abcd3P55096 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Abcd3P55096 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abcd3P55096 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Abcd3P55096 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcd3P55096 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcd3P55096 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Abcd3P55096 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcd3P55096 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Abcd3P55096 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Abcd3P55096 Gm8503-201ENSMUST00000118131 455 ntBASIC20.69■□□□□ 0.9
Abcd3P55096 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Abcd3P55096 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Abcd3P55096 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abcd3P55096 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abcd3P55096 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.67■□□□□ 0.9
Abcd3P55096 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Abcd3P55096 Gm37136-201ENSMUST00000194368 194 ntBASIC20.66■□□□□ 0.9
Abcd3P55096 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Abcd3P55096 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Abcd3P55096 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Abcd3P55096 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Abcd3P55096 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Abcd3P55096 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Abcd3P55096 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Abcd3P55096 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Abcd3P55096 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Abcd3P55096 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcd3P55096 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abcd3P55096 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Abcd3P55096 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Abcd3P55096 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Abcd3P55096 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abcd3P55096 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abcd3P55096 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Abcd3P55096 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abcd3P55096 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.6■□□□□ 0.89
Abcd3P55096 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.6■□□□□ 0.89
Abcd3P55096 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abcd3P55096 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Abcd3P55096 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Abcd3P55096 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Abcd3P55096 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Abcd3P55096 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Abcd3P55096 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Abcd3P55096 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Abcd3P55096 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Abcd3P55096 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.57■□□□□ 0.88
Abcd3P55096 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.57■□□□□ 0.88
Abcd3P55096 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.57■□□□□ 0.88
Abcd3P55096 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms