Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC4P55056 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC4P55056 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC4P55056 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC4P55056 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOC4P55056 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
APOC4P55056 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOC4P55056 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOC4P55056 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.65■□□□□ 0.58
APOC4P55056 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.65■□□□□ 0.58
APOC4P55056 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APOC4P55056 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
APOC4P55056 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
APOC4P55056 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
APOC4P55056 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOC4P55056 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APOC4P55056 HSD17B1P1-201ENST00000590052 955 ntBASIC18.64■□□□□ 0.57
APOC4P55056 ST7-202ENST00000323984 2142 ntTSL 5 BASIC18.64■□□□□ 0.57
APOC4P55056 ST7-207ENST00000393449 2127 ntTSL 5 BASIC18.64■□□□□ 0.57
APOC4P55056 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.63■□□□□ 0.57
APOC4P55056 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC4P55056 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOC4P55056 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APOC4P55056 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
APOC4P55056 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC4P55056 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.62■□□□□ 0.57
APOC4P55056 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APOC4P55056 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
APOC4P55056 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
APOC4P55056 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.61■□□□□ 0.57
APOC4P55056 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.61■□□□□ 0.57
APOC4P55056 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.61■□□□□ 0.57
APOC4P55056 AC148477.6-201ENST00000623746 465 ntBASIC18.61■□□□□ 0.57
APOC4P55056 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOC4P55056 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOC4P55056 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
APOC4P55056 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOC4P55056 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
APOC4P55056 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
APOC4P55056 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.59■□□□□ 0.57
APOC4P55056 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.59■□□□□ 0.57
APOC4P55056 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.58■□□□□ 0.57
APOC4P55056 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.58■□□□□ 0.57
APOC4P55056 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
APOC4P55056 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.58■□□□□ 0.56
APOC4P55056 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.58■□□□□ 0.56
APOC4P55056 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.58■□□□□ 0.56
APOC4P55056 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APOC4P55056 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.58■□□□□ 0.56
APOC4P55056 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APOC4P55056 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
APOC4P55056 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APOC4P55056 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APOC4P55056 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
APOC4P55056 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOC4P55056 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOC4P55056 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOC4P55056 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.57■□□□□ 0.56
APOC4P55056 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
APOC4P55056 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
APOC4P55056 AL139393.2-201ENST00000608721 2025 ntBASIC18.57■□□□□ 0.56
APOC4P55056 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
APOC4P55056 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOC4P55056 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
APOC4P55056 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.56■□□□□ 0.56
APOC4P55056 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
APOC4P55056 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
APOC4P55056 AC100797.4-201ENST00000631653 1827 ntBASIC18.56■□□□□ 0.56
APOC4P55056 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.55■□□□□ 0.56
APOC4P55056 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOC4P55056 GPX1-201ENST00000419349 1106 ntBASIC18.55■□□□□ 0.56
APOC4P55056 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.55■□□□□ 0.56
APOC4P55056 AC126177.7-201ENST00000547904 679 ntBASIC18.55■□□□□ 0.56
APOC4P55056 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOC4P55056 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOC4P55056 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOC4P55056 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOC4P55056 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
APOC4P55056 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOC4P55056 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.54■□□□□ 0.56
APOC4P55056 MIR219A2-201ENST00000608502 1504 ntBASIC18.54■□□□□ 0.56
APOC4P55056 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.54■□□□□ 0.56
APOC4P55056 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
APOC4P55056 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.53■□□□□ 0.56
APOC4P55056 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APOC4P55056 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.53■□□□□ 0.56
APOC4P55056 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
APOC4P55056 AC022413.1-201ENST00000624602 984 ntBASIC18.53■□□□□ 0.56
APOC4P55056 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOC4P55056 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOC4P55056 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.52■□□□□ 0.56
APOC4P55056 ABCB10P1-201ENST00000614297 2181 ntBASIC18.52■□□□□ 0.56
APOC4P55056 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APOC4P55056 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOC4P55056 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.51■□□□□ 0.55
APOC4P55056 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOC4P55056 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOC4P55056 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APOC4P55056 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.51■□□□□ 0.55
APOC4P55056 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms