Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 PMT1YDL095W 2454 nt8.01□□□□□ -1.13
YNL040WP53960 YIL168WYIL168W 384 nt8.01□□□□□ -1.13
YNL040WP53960 YER152CYER152C 1332 nt8.01□□□□□ -1.13
YNL040WP53960 YRF1-1YDR545W 5391 nt8□□□□□ -1.13
YNL040WP53960 YRF1-5YLR467W 5391 nt8□□□□□ -1.13
YNL040WP53960 YRF1-8YOR396W 5391 nt8□□□□□ -1.13
YNL040WP53960 GDH1YOR375C 1365 nt8□□□□□ -1.13
YNL040WP53960 KTR4YBR199W 1395 nt8□□□□□ -1.13
YNL040WP53960 TPO1YLL028W 1761 nt8□□□□□ -1.13
YNL040WP53960 MRP1YDR347W 966 nt8□□□□□ -1.13
YNL040WP53960 SPE4YLR146C 903 nt8□□□□□ -1.13
YNL040WP53960 ELP6YMR312W 822 nt8□□□□□ -1.13
YNL040WP53960 PAU21YOR394W 495 nt8□□□□□ -1.13
YNL040WP53960 PAU22YPL282C 495 nt8□□□□□ -1.13
YNL040WP53960 ELP4YPL101W 1371 nt7.99□□□□□ -1.13
YNL040WP53960 TAD2YJL035C 753 nt7.99□□□□□ -1.13
YNL040WP53960 TDH1YJL052W 999 nt7.99□□□□□ -1.13
YNL040WP53960 BEM1YBR200W 1656 nt7.98□□□□□ -1.13
YNL040WP53960 SNP1YIL061C 903 nt7.98□□□□□ -1.13
YNL040WP53960 ARG7YMR062C 1326 nt7.98□□□□□ -1.13
YNL040WP53960 ALR1YOL130W 2580 nt7.96□□□□□ -1.13
YNL040WP53960 RRT6YGL146C 936 nt7.96□□□□□ -1.14
YNL040WP53960 YOR343CYOR343C 327 nt7.96□□□□□ -1.14
YNL040WP53960 MTC6YHR151C 1581 nt7.96□□□□□ -1.14
YNL040WP53960 HRA1HRA1 564 nt7.95□□□□□ -1.14
YNL040WP53960 TOM71YHR117W 1920 nt7.94□□□□□ -1.14
YNL040WP53960 PDC5YLR134W 1692 nt7.93□□□□□ -1.14
YNL040WP53960 TOP3YLR234W 1971 nt7.92□□□□□ -1.14
YNL040WP53960 AVL9YLR114C 2295 nt7.92□□□□□ -1.14
YNL040WP53960 DST1YGL043W 930 nt7.91□□□□□ -1.14
YNL040WP53960 SNA3YJL151C 402 nt7.91□□□□□ -1.14
YNL040WP53960 ADE1YAR015W 921 nt7.91□□□□□ -1.14
YNL040WP53960 APT1YML022W 564 nt7.91□□□□□ -1.14
YNL040WP53960 RSC9YML127W 1746 nt7.91□□□□□ -1.14
YNL040WP53960 tL(UAA)B1tL(UAA)B1 84 nt7.9□□□□□ -1.14
YNL040WP53960 tL(UAA)B2tL(UAA)B2 84 nt7.9□□□□□ -1.14
YNL040WP53960 tL(UAA)DtL(UAA)D 84 nt7.9□□□□□ -1.14
YNL040WP53960 SUP51tL(UAA)J 84 nt7.9□□□□□ -1.14
YNL040WP53960 tL(UAA)KtL(UAA)K 84 nt7.9□□□□□ -1.14
YNL040WP53960 tL(UAA)LtL(UAA)L 84 nt7.9□□□□□ -1.14
YNL040WP53960 tL(UAA)NtL(UAA)N 84 nt7.9□□□□□ -1.14
YNL040WP53960 YMR253CYMR253C 1245 nt7.9□□□□□ -1.14
YNL040WP53960 MNN9YPL050C 1188 nt7.9□□□□□ -1.14
YNL040WP53960 NUP53YMR153W 1428 nt7.89□□□□□ -1.15
YNL040WP53960 CKB1YGL019W 837 nt7.89□□□□□ -1.15
YNL040WP53960 ATP10YLR393W 840 nt7.89□□□□□ -1.15
YNL040WP53960 PSP2YML017W 1782 nt7.89□□□□□ -1.15
YNL040WP53960 RPL12BYDR418W 498 nt7.88□□□□□ -1.15
YNL040WP53960 CPR2YHR057C 618 nt7.88□□□□□ -1.15
YNL040WP53960 YLR030WYLR030W 792 nt7.88□□□□□ -1.15
YNL040WP53960 PEX28YHR150W 1740 nt7.88□□□□□ -1.15
YNL040WP53960 CDA1YLR307W 906 nt7.87□□□□□ -1.15
YNL040WP53960 ERR3YMR323W 1314 nt7.86□□□□□ -1.15
YNL040WP53960 ERR1YOR393W 1314 nt7.86□□□□□ -1.15
YNL040WP53960 ERR2YPL281C 1314 nt7.86□□□□□ -1.15
YNL040WP53960 YAL016C-AYAL016C-A 315 nt7.86□□□□□ -1.15
YNL040WP53960 TOS1YBR162C 1368 nt7.85□□□□□ -1.15
YNL040WP53960 SPR1YOR190W 1338 nt7.85□□□□□ -1.15
YNL040WP53960 YJL043WYJL043W 774 nt7.85□□□□□ -1.15
YNL040WP53960 TES1YJR019C 1050 nt7.85□□□□□ -1.15
YNL040WP53960 AOS1YPR180W 1044 nt7.85□□□□□ -1.15
YNL040WP53960 HAC1YFL031W 717 nt7.84□□□□□ -1.15
YNL040WP53960 HAM1YJR069C 594 nt7.84□□□□□ -1.15
YNL040WP53960 RUP1YOR138C 2016 nt7.83□□□□□ -1.16
YNL040WP53960 PNS1YOR161C 1620 nt7.83□□□□□ -1.16
YNL040WP53960 CPT1YNL130C 1182 nt7.83□□□□□ -1.16
YNL040WP53960 STE3YKL178C 1413 nt7.82□□□□□ -1.16
YNL040WP53960 YKR018CYKR018C 2178 nt7.82□□□□□ -1.16
YNL040WP53960 YBL113CYBL113C 2379 nt7.82□□□□□ -1.16
YNL040WP53960 FUS3YBL016W 1062 nt7.8□□□□□ -1.16
YNL040WP53960 HEM14YER014W 1620 nt7.8□□□□□ -1.16
YNL040WP53960 PMA2YPL036W 2844 nt7.8□□□□□ -1.16
YNL040WP53960 RCF2YNR018W 675 nt7.79□□□□□ -1.16
YNL040WP53960 FRT1YOR324C 1809 nt7.79□□□□□ -1.16
YNL040WP53960 YNL295WYNL295W 1575 nt7.79□□□□□ -1.16
YNL040WP53960 RRP43YCR035C 1185 nt7.78□□□□□ -1.16
YNL040WP53960 EDC2YER035W 438 nt7.78□□□□□ -1.16
YNL040WP53960 YHR033WYHR033W 1272 nt7.78□□□□□ -1.16
YNL040WP53960 LEO1YOR123C 1395 nt7.78□□□□□ -1.16
YNL040WP53960 GGC1YDL198C 903 nt7.77□□□□□ -1.17
YNL040WP53960 VPS65YLR322W 315 nt7.77□□□□□ -1.17
YNL040WP53960 POB3YML069W 1659 nt7.76□□□□□ -1.17
YNL040WP53960 MAL31YBR298C 1845 nt7.76□□□□□ -1.17
YNL040WP53960 YDR476CYDR476C 675 nt7.76□□□□□ -1.17
YNL040WP53960 YER137CYER137C 447 nt7.76□□□□□ -1.17
YNL040WP53960 YML034C-AYML034C-A 399 nt7.76□□□□□ -1.17
YNL040WP53960 YOR041CYOR041C 432 nt7.76□□□□□ -1.17
YNL040WP53960 AQR1YNL065W 1761 nt7.75□□□□□ -1.17
YNL040WP53960 NSG2YNL156C 900 nt7.75□□□□□ -1.17
YNL040WP53960 INP54YOL065C 1155 nt7.75□□□□□ -1.17
YNL040WP53960 YOR268CYOR268C 399 nt7.75□□□□□ -1.17
YNL040WP53960 PET494YNR045W 1470 nt7.75□□□□□ -1.17
YNL040WP53960 GNA1YFL017C 480 nt7.74□□□□□ -1.17
YNL040WP53960 KAE1YKR038C 1161 nt7.74□□□□□ -1.17
YNL040WP53960 RMD8YFR048W 1989 nt7.73□□□□□ -1.17
YNL040WP53960 ERV25YML012W 636 nt7.73□□□□□ -1.17
YNL040WP53960 ATO2YNR002C 849 nt7.73□□□□□ -1.17
YNL040WP53960 ERV2YPR037C 591 nt7.73□□□□□ -1.17
YNL040WP53960 MFG1YDL233W 1377 nt7.72□□□□□ -1.17
YNL040WP53960 NCA3YJL116C 1014 nt7.72□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 95.7 ms