Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl9P51670 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl9P51670 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl9P51670 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ccl9P51670 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccl9P51670 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.24■□□□□ 0.83
Ccl9P51670 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccl9P51670 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ccl9P51670 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl9P51670 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl9P51670 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.22■□□□□ 0.83
Ccl9P51670 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.22■□□□□ 0.83
Ccl9P51670 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccl9P51670 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccl9P51670 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.2■□□□□ 0.82
Ccl9P51670 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccl9P51670 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccl9P51670 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccl9P51670 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccl9P51670 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl9P51670 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl9P51670 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl9P51670 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl9P51670 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccl9P51670 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ccl9P51670 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccl9P51670 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccl9P51670 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccl9P51670 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccl9P51670 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ccl9P51670 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccl9P51670 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccl9P51670 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccl9P51670 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ccl9P51670 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccl9P51670 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccl9P51670 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.15■□□□□ 0.82
Ccl9P51670 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccl9P51670 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccl9P51670 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccl9P51670 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccl9P51670 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccl9P51670 Nkain2-201ENSMUST00000092602 558 ntBASIC20.14■□□□□ 0.81
Ccl9P51670 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccl9P51670 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ccl9P51670 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccl9P51670 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.13■□□□□ 0.81
Ccl9P51670 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.13■□□□□ 0.81
Ccl9P51670 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccl9P51670 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ccl9P51670 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccl9P51670 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccl9P51670 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.12■□□□□ 0.81
Ccl9P51670 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccl9P51670 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccl9P51670 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.12■□□□□ 0.81
Ccl9P51670 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Ccl9P51670 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccl9P51670 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ccl9P51670 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccl9P51670 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.11■□□□□ 0.81
Ccl9P51670 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccl9P51670 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccl9P51670 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccl9P51670 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccl9P51670 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.1■□□□□ 0.81
Ccl9P51670 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccl9P51670 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccl9P51670 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccl9P51670 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ccl9P51670 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccl9P51670 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccl9P51670 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccl9P51670 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccl9P51670 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccl9P51670 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Ccl9P51670 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccl9P51670 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl9P51670 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ccl9P51670 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccl9P51670 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Ccl9P51670 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl9P51670 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl9P51670 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.07■□□□□ 0.8
Ccl9P51670 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccl9P51670 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Ccl9P51670 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccl9P51670 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccl9P51670 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.06■□□□□ 0.8
Ccl9P51670 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccl9P51670 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccl9P51670 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccl9P51670 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccl9P51670 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ccl9P51670 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccl9P51670 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ccl9P51670 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccl9P51670 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccl9P51670 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccl9P51670 Particl-201ENSMUST00000205370 1560 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms