Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RAB5CP51148 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB5CP51148 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB5CP51148 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB5CP51148 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB5CP51148 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB5CP51148 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB5CP51148 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB5CP51148 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB5CP51148 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
RAB5CP51148 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB5CP51148 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB5CP51148 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB5CP51148 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RAB5CP51148 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB5CP51148 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB5CP51148 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RAB5CP51148 AP004833.2-201ENST00000532228 1454 ntBASIC20.38■□□□□ 0.85
RAB5CP51148 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB5CP51148 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB5CP51148 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB5CP51148 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB5CP51148 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB5CP51148 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB5CP51148 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB5CP51148 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB5CP51148 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RAB5CP51148 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB5CP51148 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB5CP51148 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RAB5CP51148 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RAB5CP51148 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB5CP51148 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB5CP51148 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB5CP51148 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB5CP51148 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB5CP51148 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB5CP51148 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.35■□□□□ 0.85
RAB5CP51148 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB5CP51148 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB5CP51148 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.34■□□□□ 0.85
RAB5CP51148 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB5CP51148 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RAB5CP51148 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB5CP51148 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
RAB5CP51148 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.33■□□□□ 0.85
RAB5CP51148 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAB5CP51148 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RAB5CP51148 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RAB5CP51148 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.32■□□□□ 0.84
RAB5CP51148 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB5CP51148 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB5CP51148 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB5CP51148 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB5CP51148 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB5CP51148 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB5CP51148 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB5CP51148 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB5CP51148 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB5CP51148 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB5CP51148 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB5CP51148 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB5CP51148 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB5CP51148 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
RAB5CP51148 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB5CP51148 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB5CP51148 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB5CP51148 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB5CP51148 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB5CP51148 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB5CP51148 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB5CP51148 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB5CP51148 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB5CP51148 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.27■□□□□ 0.83
RAB5CP51148 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB5CP51148 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB5CP51148 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB5CP51148 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB5CP51148 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAB5CP51148 AC010864.1-201ENST00000609407 1511 ntBASIC20.26■□□□□ 0.83
RAB5CP51148 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB5CP51148 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB5CP51148 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB5CP51148 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB5CP51148 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB5CP51148 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB5CP51148 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB5CP51148 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB5CP51148 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB5CP51148 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.23■□□□□ 0.83
RAB5CP51148 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB5CP51148 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB5CP51148 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
RAB5CP51148 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB5CP51148 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB5CP51148 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB5CP51148 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB5CP51148 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RAB5CP51148 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB5CP51148 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms