Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Atp6v1aP50516 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC28.5■■■□□ 2.15
Atp6v1aP50516 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Atp6v1aP50516 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Atp6v1aP50516 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Atp6v1aP50516 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
Atp6v1aP50516 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.5■■■□□ 2.15
Atp6v1aP50516 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Atp6v1aP50516 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Atp6v1aP50516 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Atp6v1aP50516 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Atp6v1aP50516 Gm14523-201ENSMUST00000117260 558 ntBASIC28.47■■■□□ 2.15
Atp6v1aP50516 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Atp6v1aP50516 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Atp6v1aP50516 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Atp6v1aP50516 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Atp6v1aP50516 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.46■■■□□ 2.15
Atp6v1aP50516 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC28.45■■■□□ 2.14
Atp6v1aP50516 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Atp6v1aP50516 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Atp6v1aP50516 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Atp6v1aP50516 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Atp6v1aP50516 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.43■■■□□ 2.14
Atp6v1aP50516 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Atp6v1aP50516 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Atp6v1aP50516 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Atp6v1aP50516 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Atp6v1aP50516 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Atp6v1aP50516 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Atp6v1aP50516 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Atp6v1aP50516 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Atp6v1aP50516 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.4■■■□□ 2.14
Atp6v1aP50516 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Atp6v1aP50516 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Atp6v1aP50516 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.39■■■□□ 2.14
Atp6v1aP50516 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
Atp6v1aP50516 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Atp6v1aP50516 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Atp6v1aP50516 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.37■■■□□ 2.13
Atp6v1aP50516 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
Atp6v1aP50516 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Atp6v1aP50516 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.37■■■□□ 2.13
Atp6v1aP50516 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
Atp6v1aP50516 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Atp6v1aP50516 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
Atp6v1aP50516 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Atp6v1aP50516 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Atp6v1aP50516 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC28.35■■■□□ 2.13
Atp6v1aP50516 Gm9812-201ENSMUST00000061934 968 ntBASIC28.35■■■□□ 2.13
Atp6v1aP50516 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Atp6v1aP50516 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Atp6v1aP50516 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Atp6v1aP50516 AC151971.4-201ENSMUST00000214717 704 ntBASIC28.32■■■□□ 2.12
Atp6v1aP50516 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.32■■■□□ 2.12
Atp6v1aP50516 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Atp6v1aP50516 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.32■■■□□ 2.12
Atp6v1aP50516 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
Atp6v1aP50516 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC28.31■■■□□ 2.12
Atp6v1aP50516 Gm5067-201ENSMUST00000170449 1009 ntBASIC28.3■■■□□ 2.12
Atp6v1aP50516 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC28.3■■■□□ 2.12
Atp6v1aP50516 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Atp6v1aP50516 Zxda-201ENSMUST00000117281 2621 ntBASIC28.29■■■□□ 2.12
Atp6v1aP50516 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Atp6v1aP50516 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Atp6v1aP50516 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Atp6v1aP50516 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Atp6v1aP50516 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.26■■■□□ 2.11
Atp6v1aP50516 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Atp6v1aP50516 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
Atp6v1aP50516 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Atp6v1aP50516 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Atp6v1aP50516 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Atp6v1aP50516 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.24■■■□□ 2.11
Atp6v1aP50516 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28.24■■■□□ 2.11
Atp6v1aP50516 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Atp6v1aP50516 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Atp6v1aP50516 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
Atp6v1aP50516 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Atp6v1aP50516 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Atp6v1aP50516 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Atp6v1aP50516 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Atp6v1aP50516 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC28.21■■■□□ 2.11
Atp6v1aP50516 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Atp6v1aP50516 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Atp6v1aP50516 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Atp6v1aP50516 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Atp6v1aP50516 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Atp6v1aP50516 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.2■■■□□ 2.1
Atp6v1aP50516 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Atp6v1aP50516 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Atp6v1aP50516 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Atp6v1aP50516 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Atp6v1aP50516 Gm10420-201ENSMUST00000121713 882 ntBASIC28.18■■■□□ 2.1
Atp6v1aP50516 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Atp6v1aP50516 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC28.18■■■□□ 2.1
Atp6v1aP50516 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Atp6v1aP50516 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Atp6v1aP50516 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Atp6v1aP50516 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Atp6v1aP50516 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms