Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xcl1P47993 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xcl1P47993 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Xcl1P47993 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Xcl1P47993 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xcl1P47993 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Xcl1P47993 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xcl1P47993 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xcl1P47993 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Xcl1P47993 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Xcl1P47993 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xcl1P47993 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Xcl1P47993 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.29■□□□□ 0.04
Xcl1P47993 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Xcl1P47993 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xcl1P47993 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xcl1P47993 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xcl1P47993 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xcl1P47993 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xcl1P47993 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.28■□□□□ 0.04
Xcl1P47993 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xcl1P47993 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Xcl1P47993 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Xcl1P47993 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Xcl1P47993 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Xcl1P47993 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Xcl1P47993 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Xcl1P47993 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Xcl1P47993 Mipep-204ENSMUST00000225043 1548 ntBASIC15.27■□□□□ 0.03
Xcl1P47993 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xcl1P47993 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Xcl1P47993 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.26■□□□□ 0.03
Xcl1P47993 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xcl1P47993 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xcl1P47993 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xcl1P47993 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Xcl1P47993 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Xcl1P47993 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Xcl1P47993 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Xcl1P47993 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Xcl1P47993 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.25■□□□□ 0.03
Xcl1P47993 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Xcl1P47993 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Xcl1P47993 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Xcl1P47993 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Xcl1P47993 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Xcl1P47993 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Xcl1P47993 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.24■□□□□ 0.03
Xcl1P47993 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Xcl1P47993 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Xcl1P47993 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.24■□□□□ 0.03
Xcl1P47993 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Xcl1P47993 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.23■□□□□ 0.03
Xcl1P47993 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Xcl1P47993 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Xcl1P47993 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Xcl1P47993 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Xcl1P47993 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Xcl1P47993 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Xcl1P47993 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Xcl1P47993 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Xcl1P47993 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Xcl1P47993 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC15.2■□□□□ 0.02
Xcl1P47993 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC15.2■□□□□ 0.02
Xcl1P47993 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Xcl1P47993 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Xcl1P47993 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Xcl1P47993 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Xcl1P47993 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Xcl1P47993 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Xcl1P47993 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Xcl1P47993 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Xcl1P47993 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Xcl1P47993 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Xcl1P47993 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.18■□□□□ 0.02
Xcl1P47993 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Xcl1P47993 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Xcl1P47993 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Xcl1P47993 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Xcl1P47993 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Xcl1P47993 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Xcl1P47993 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Xcl1P47993 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Xcl1P47993 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Xcl1P47993 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Xcl1P47993 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Xcl1P47993 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Xcl1P47993 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Xcl1P47993 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Xcl1P47993 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC15.16■□□□□ 0.02
Xcl1P47993 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Xcl1P47993 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Xcl1P47993 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.16■□□□□ 0.02
Xcl1P47993 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Xcl1P47993 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.15■□□□□ 0.02
Xcl1P47993 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Xcl1P47993 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.15■□□□□ 0.02
Xcl1P47993 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Xcl1P47993 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Xcl1P47993 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms