Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 BUD31YCR063W 474 nt6.95□□□□□ -1.3
CUP9P41817 PUP2YGR253C 783 nt6.95□□□□□ -1.3
CUP9P41817 YML079WYML079W 606 nt6.95□□□□□ -1.3
CUP9P41817 MEX67YPL169C 1800 nt6.94□□□□□ -1.3
CUP9P41817 DUR3YHL016C 2208 nt6.94□□□□□ -1.3
CUP9P41817 DIP5YPL265W 1827 nt6.93□□□□□ -1.3
CUP9P41817 TDA4YJR116W 840 nt6.93□□□□□ -1.3
CUP9P41817 COS10YNR075W 1125 nt6.93□□□□□ -1.3
CUP9P41817 ORT1YOR130C 879 nt6.93□□□□□ -1.3
CUP9P41817 RSC4YKR008W 1878 nt6.92□□□□□ -1.3
CUP9P41817 PIH1YHR034C 1035 nt6.92□□□□□ -1.3
CUP9P41817 HIS3YOR202W 663 nt6.91□□□□□ -1.3
CUP9P41817 INO1YJL153C 1602 nt6.9□□□□□ -1.3
CUP9P41817 ABP1YCR088W 1779 nt6.9□□□□□ -1.3
CUP9P41817 LEA1YPL213W 717 nt6.9□□□□□ -1.3
CUP9P41817 FTH1YBR207W 1398 nt6.9□□□□□ -1.31
CUP9P41817 CRN1YLR429W 1956 nt6.89□□□□□ -1.31
CUP9P41817 LAT1YNL071W 1449 nt6.88□□□□□ -1.31
CUP9P41817 NCA3YJL116C 1014 nt6.88□□□□□ -1.31
CUP9P41817 ATP23YNR020C 813 nt6.88□□□□□ -1.31
CUP9P41817 TGL5YOR081C 2250 nt6.88□□□□□ -1.31
CUP9P41817 SLM3YDL033C 1254 nt6.87□□□□□ -1.31
CUP9P41817 GLY1YEL046C 1164 nt6.87□□□□□ -1.31
CUP9P41817 CPR2YHR057C 618 nt6.87□□□□□ -1.31
CUP9P41817 STS1YIR011C 960 nt6.86□□□□□ -1.31
CUP9P41817 MNN9YPL050C 1188 nt6.86□□□□□ -1.31
CUP9P41817 ERV2YPR037C 591 nt6.86□□□□□ -1.31
CUP9P41817 snR4snR4 186 nt6.86□□□□□ -1.31
CUP9P41817 TOM71YHR117W 1920 nt6.86□□□□□ -1.31
CUP9P41817 ALG7YBR243C 1347 nt6.85□□□□□ -1.31
CUP9P41817 INM1YHR046C 888 nt6.85□□□□□ -1.31
CUP9P41817 YAL019W-AYAL019W-A 570 nt6.85□□□□□ -1.31
CUP9P41817 TES1YJR019C 1050 nt6.85□□□□□ -1.31
CUP9P41817 MSI1YBR195C 1269 nt6.85□□□□□ -1.31
CUP9P41817 MAS2YHR024C 1449 nt6.84□□□□□ -1.31
CUP9P41817 YBL111CYBL111C 2004 nt6.84□□□□□ -1.31
CUP9P41817 RRP43YCR035C 1185 nt6.84□□□□□ -1.31
CUP9P41817 ARO3YDR035W 1113 nt6.84□□□□□ -1.31
CUP9P41817 YJR142WYJR142W 1029 nt6.84□□□□□ -1.31
CUP9P41817 URA1YKL216W 945 nt6.84□□□□□ -1.31
CUP9P41817 MDL2YPL270W 2322 nt6.84□□□□□ -1.31
CUP9P41817 DOC1YGL240W 753 nt6.83□□□□□ -1.32
CUP9P41817 SNP1YIL061C 903 nt6.83□□□□□ -1.32
CUP9P41817 MRP7YNL005C 1116 nt6.83□□□□□ -1.32
CUP9P41817 TIF3YPR163C 1311 nt6.82□□□□□ -1.32
CUP9P41817 YOX1YML027W 1158 nt6.82□□□□□ -1.32
CUP9P41817 PTH2YBL057C 627 nt6.82□□□□□ -1.32
CUP9P41817 YNL140CYNL140C 570 nt6.82□□□□□ -1.32
CUP9P41817 DUS3YLR401C 2007 nt6.82□□□□□ -1.32
CUP9P41817 STE3YKL178C 1413 nt6.82□□□□□ -1.32
CUP9P41817 WSC4YHL028W 1818 nt6.81□□□□□ -1.32
CUP9P41817 YGL081WYGL081W 963 nt6.81□□□□□ -1.32
CUP9P41817 NMA2YGR010W 1188 nt6.81□□□□□ -1.32
CUP9P41817 DIA4YHR011W 1341 nt6.8□□□□□ -1.32
CUP9P41817 INP54YOL065C 1155 nt6.79□□□□□ -1.32
CUP9P41817 YNL295WYNL295W 1575 nt6.78□□□□□ -1.32
CUP9P41817 PSA1YDL055C 1086 nt6.78□□□□□ -1.32
CUP9P41817 HRB1YNL004W 1365 nt6.78□□□□□ -1.32
CUP9P41817 CKI1YLR133W 1749 nt6.77□□□□□ -1.33
CUP9P41817 NSG2YNL156C 900 nt6.77□□□□□ -1.33
CUP9P41817 MCM5YLR274W 2328 nt6.77□□□□□ -1.33
CUP9P41817 MRN1YPL184C 1839 nt6.76□□□□□ -1.33
CUP9P41817 DST1YGL043W 930 nt6.76□□□□□ -1.33
CUP9P41817 CDC3YLR314C 1563 nt6.76□□□□□ -1.33
CUP9P41817 ADE16YLR028C 1776 nt6.76□□□□□ -1.33
CUP9P41817 OSM1YJR051W 1506 nt6.76□□□□□ -1.33
CUP9P41817 ADH6YMR318C 1083 nt6.75□□□□□ -1.33
CUP9P41817 YPQ1YOL092W 927 nt6.75□□□□□ -1.33
CUP9P41817 UME1YPL139C 1383 nt6.74□□□□□ -1.33
CUP9P41817 KTR4YBR199W 1395 nt6.74□□□□□ -1.33
CUP9P41817 YPL067CYPL067C 597 nt6.74□□□□□ -1.33
CUP9P41817 FIT1YDR534C 1587 nt6.74□□□□□ -1.33
CUP9P41817 YLR173WYLR173W 1827 nt6.73□□□□□ -1.33
CUP9P41817 YJL144WYJL144W 315 nt6.73□□□□□ -1.33
CUP9P41817 YML034C-AYML034C-A 399 nt6.73□□□□□ -1.33
CUP9P41817 YPT10YBR264C 600 nt6.73□□□□□ -1.33
CUP9P41817 ALR1YOL130W 2580 nt6.73□□□□□ -1.33
CUP9P41817 SPS1YDR523C 1473 nt6.73□□□□□ -1.33
CUP9P41817 PIL1YGR086C 1020 nt6.72□□□□□ -1.33
CUP9P41817 YHR033WYHR033W 1272 nt6.72□□□□□ -1.33
CUP9P41817 PRY2YKR013W 990 nt6.72□□□□□ -1.33
CUP9P41817 DSC3YOR223W 879 nt6.72□□□□□ -1.33
CUP9P41817 CST26YBR042C 1194 nt6.72□□□□□ -1.33
CUP9P41817 AOS1YPR180W 1044 nt6.72□□□□□ -1.33
CUP9P41817 LPD1YFL018C 1500 nt6.71□□□□□ -1.33
CUP9P41817 GET2YER083C 858 nt6.71□□□□□ -1.34
CUP9P41817 PRS4YBL068W 981 nt6.71□□□□□ -1.34
CUP9P41817 AAD14YNL331C 1131 nt6.71□□□□□ -1.34
CUP9P41817 UFD1YGR048W 1086 nt6.7□□□□□ -1.34
CUP9P41817 AIM46YHR199C 933 nt6.7□□□□□ -1.34
CUP9P41817 HAM1YJR069C 594 nt6.7□□□□□ -1.34
CUP9P41817 MCP1YOR228C 909 nt6.7□□□□□ -1.34
CUP9P41817 MTC6YHR151C 1581 nt6.69□□□□□ -1.34
CUP9P41817 PPZ2YDR436W 2133 nt6.69□□□□□ -1.34
CUP9P41817 TRR2YHR106W 1029 nt6.69□□□□□ -1.34
CUP9P41817 ELP6YMR312W 822 nt6.69□□□□□ -1.34
CUP9P41817 CYS3YAL012W 1185 nt6.68□□□□□ -1.34
CUP9P41817 CDA1YLR307W 906 nt6.68□□□□□ -1.34
CUP9P41817 MBF1YOR298C-A 456 nt6.68□□□□□ -1.34
CUP9P41817 MDH2YOL126C 1134 nt6.67□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 37.3 ms