Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 ESBP6YNL125C 2022 nt9.65□□□□□ -0.86
RTR1P40084 CPR2YHR057C 618 nt9.65□□□□□ -0.86
RTR1P40084 NCA3YJL116C 1014 nt9.65□□□□□ -0.86
RTR1P40084 YDR476CYDR476C 675 nt9.64□□□□□ -0.87
RTR1P40084 STE3YKL178C 1413 nt9.61□□□□□ -0.87
RTR1P40084 ALD5YER073W 1563 nt9.61□□□□□ -0.87
RTR1P40084 DIA4YHR011W 1341 nt9.6□□□□□ -0.87
RTR1P40084 AOS1YPR180W 1044 nt9.6□□□□□ -0.87
RTR1P40084 MEX67YPL169C 1800 nt9.59□□□□□ -0.87
RTR1P40084 TPO1YLL028W 1761 nt9.59□□□□□ -0.87
RTR1P40084 HAM1YJR069C 594 nt9.58□□□□□ -0.88
RTR1P40084 CDA1YLR307W 906 nt9.58□□□□□ -0.88
RTR1P40084 YNL295WYNL295W 1575 nt9.58□□□□□ -0.88
RTR1P40084 RRP43YCR035C 1185 nt9.57□□□□□ -0.88
RTR1P40084 HXK1YFR053C 1458 nt9.56□□□□□ -0.88
RTR1P40084 CRN1YLR429W 1956 nt9.55□□□□□ -0.88
RTR1P40084 YLR358CYLR358C 564 nt9.55□□□□□ -0.88
RTR1P40084 YML034C-AYML034C-A 399 nt9.55□□□□□ -0.88
RTR1P40084 ERV2YPR037C 591 nt9.55□□□□□ -0.88
RTR1P40084 BAP3YDR046C 1815 nt9.54□□□□□ -0.88
RTR1P40084 RPL2AYFR031C-A 765 nt9.53□□□□□ -0.88
RTR1P40084 TES1YJR019C 1050 nt9.53□□□□□ -0.88
RTR1P40084 PMT1YDL095W 2454 nt9.52□□□□□ -0.89
RTR1P40084 INP54YOL065C 1155 nt9.52□□□□□ -0.89
RTR1P40084 YHR033WYHR033W 1272 nt9.5□□□□□ -0.89
RTR1P40084 YJR142WYJR142W 1029 nt9.5□□□□□ -0.89
RTR1P40084 MFG1YDL233W 1377 nt9.5□□□□□ -0.89
RTR1P40084 PSA1YDL055C 1086 nt9.49□□□□□ -0.89
RTR1P40084 AVL9YLR114C 2295 nt9.49□□□□□ -0.89
RTR1P40084 SPS1YDR523C 1473 nt9.48□□□□□ -0.89
RTR1P40084 PRE5YMR314W 705 nt9.48□□□□□ -0.89
RTR1P40084 MET13YGL125W 1803 nt9.47□□□□□ -0.89
RTR1P40084 STS1YIR011C 960 nt9.47□□□□□ -0.89
RTR1P40084 ERV25YML012W 636 nt9.47□□□□□ -0.89
RTR1P40084 DUS3YLR401C 2007 nt9.47□□□□□ -0.89
RTR1P40084 CKB1YGL019W 837 nt9.46□□□□□ -0.9
RTR1P40084 NMA2YGR010W 1188 nt9.46□□□□□ -0.9
RTR1P40084 YPC1YBR183W 951 nt9.45□□□□□ -0.9
RTR1P40084 DOC1YGL240W 753 nt9.44□□□□□ -0.9
RTR1P40084 ADE16YLR028C 1776 nt9.44□□□□□ -0.9
RTR1P40084 PPZ2YDR436W 2133 nt9.44□□□□□ -0.9
RTR1P40084 VPS65YLR322W 315 nt9.43□□□□□ -0.9
RTR1P40084 DAL80YKR034W 810 nt9.42□□□□□ -0.9
RTR1P40084 OSM1YJR051W 1506 nt9.41□□□□□ -0.9
RTR1P40084 HRB1YNL004W 1365 nt9.41□□□□□ -0.9
RTR1P40084 YDR215CYDR215C 414 nt9.41□□□□□ -0.9
RTR1P40084 GET2YER083C 858 nt9.41□□□□□ -0.9
RTR1P40084 MSI1YBR195C 1269 nt9.41□□□□□ -0.9
RTR1P40084 PEX28YHR150W 1740 nt9.41□□□□□ -0.9
RTR1P40084 MET2YNL277W 1461 nt9.4□□□□□ -0.9
RTR1P40084 PDC5YLR134W 1692 nt9.4□□□□□ -0.9
RTR1P40084 PIH1YHR034C 1035 nt9.4□□□□□ -0.9
RTR1P40084 PET10YKR046C 852 nt9.4□□□□□ -0.9
RTR1P40084 ADH6YMR318C 1083 nt9.4□□□□□ -0.9
RTR1P40084 ATP23YNR020C 813 nt9.4□□□□□ -0.9
RTR1P40084 MDH2YOL126C 1134 nt9.4□□□□□ -0.9
RTR1P40084 YPT10YBR264C 600 nt9.4□□□□□ -0.9
RTR1P40084 YML079WYML079W 606 nt9.39□□□□□ -0.91
RTR1P40084 YGL081WYGL081W 963 nt9.38□□□□□ -0.91
RTR1P40084 RCF2YNR018W 675 nt9.38□□□□□ -0.91
RTR1P40084 DSC3YOR223W 879 nt9.38□□□□□ -0.91
RTR1P40084 CDC3YLR314C 1563 nt9.37□□□□□ -0.91
RTR1P40084 HOG1YLR113W 1308 nt9.37□□□□□ -0.91
RTR1P40084 SDH8YBR269C 417 nt9.37□□□□□ -0.91
RTR1P40084 BDS1YOL164W 1941 nt9.37□□□□□ -0.91
RTR1P40084 PMT7YDR307W 1989 nt9.36□□□□□ -0.91
RTR1P40084 OPI1YHL020C 1215 nt9.36□□□□□ -0.91
RTR1P40084 RPR1RPR1 369 nt9.36□□□□□ -0.91
RTR1P40084 LEO1YOR123C 1395 nt9.36□□□□□ -0.91
RTR1P40084 SKP1YDR328C 585 nt9.35□□□□□ -0.91
RTR1P40084 SNA3YJL151C 402 nt9.35□□□□□ -0.91
RTR1P40084 PRY2YKR013W 990 nt9.34□□□□□ -0.91
RTR1P40084 UME1YPL139C 1383 nt9.34□□□□□ -0.91
RTR1P40084 RSC9YML127W 1746 nt9.34□□□□□ -0.92
RTR1P40084 YPL247CYPL247C 1572 nt9.33□□□□□ -0.92
RTR1P40084 MAS2YHR024C 1449 nt9.33□□□□□ -0.92
RTR1P40084 PUP2YGR253C 783 nt9.33□□□□□ -0.92
RTR1P40084 CAR2YLR438W 1275 nt9.33□□□□□ -0.92
RTR1P40084 CKI1YLR133W 1749 nt9.32□□□□□ -0.92
RTR1P40084 HMG2YLR450W 3138 nt9.32□□□□□ -0.92
RTR1P40084 SGF73YGL066W 1974 nt9.32□□□□□ -0.92
RTR1P40084 PIL1YGR086C 1020 nt9.31□□□□□ -0.92
RTR1P40084 PFS2YNL317W 1398 nt9.31□□□□□ -0.92
RTR1P40084 RUP1YOR138C 2016 nt9.31□□□□□ -0.92
RTR1P40084 HSV2YGR223C 1347 nt9.29□□□□□ -0.92
RTR1P40084 SFP1YLR403W 2052 nt9.28□□□□□ -0.92
RTR1P40084 MDL2YPL270W 2322 nt9.27□□□□□ -0.92
RTR1P40084 YEL034C-AYEL034C-A 603 nt9.27□□□□□ -0.93
RTR1P40084 YAL019W-AYAL019W-A 570 nt9.27□□□□□ -0.93
RTR1P40084 SNF7YLR025W 723 nt9.27□□□□□ -0.93
RTR1P40084 YBL111CYBL111C 2004 nt9.26□□□□□ -0.93
RTR1P40084 SLM3YDL033C 1254 nt9.26□□□□□ -0.93
RTR1P40084 CYS3YAL012W 1185 nt9.26□□□□□ -0.93
RTR1P40084 YPQ1YOL092W 927 nt9.25□□□□□ -0.93
RTR1P40084 YBL113CYBL113C 2379 nt9.24□□□□□ -0.93
RTR1P40084 PTH2YBL057C 627 nt9.24□□□□□ -0.93
RTR1P40084 YPL067CYPL067C 597 nt9.24□□□□□ -0.93
RTR1P40084 BSP1YPR171W 1731 nt9.24□□□□□ -0.93
RTR1P40084 HNM1YGL077C 1692 nt9.23□□□□□ -0.93
RTR1P40084 CCW12YLR110C 402 nt9.23□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 107.5 ms