Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
PdgfbP31240 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PdgfbP31240 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PdgfbP31240 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PdgfbP31240 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.06■■□□□ 1.44
PdgfbP31240 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.06■■□□□ 1.44
PdgfbP31240 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PdgfbP31240 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
PdgfbP31240 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.05■■□□□ 1.44
PdgfbP31240 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.05■■□□□ 1.44
PdgfbP31240 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PdgfbP31240 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PdgfbP31240 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PdgfbP31240 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.04■■□□□ 1.44
PdgfbP31240 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PdgfbP31240 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PdgfbP31240 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PdgfbP31240 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PdgfbP31240 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PdgfbP31240 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PdgfbP31240 Gm10420-201ENSMUST00000121713 882 ntBASIC24.01■■□□□ 1.43
PdgfbP31240 Gm5921-201ENSMUST00000075898 882 ntBASIC24.01■■□□□ 1.43
PdgfbP31240 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PdgfbP31240 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24■■□□□ 1.43
PdgfbP31240 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24■■□□□ 1.43
PdgfbP31240 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24■■□□□ 1.43
PdgfbP31240 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.99■■□□□ 1.43
PdgfbP31240 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PdgfbP31240 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PdgfbP31240 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PdgfbP31240 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PdgfbP31240 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PdgfbP31240 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PdgfbP31240 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PdgfbP31240 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PdgfbP31240 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PdgfbP31240 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.97■■□□□ 1.43
PdgfbP31240 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.97■■□□□ 1.43
PdgfbP31240 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PdgfbP31240 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.96■■□□□ 1.43
PdgfbP31240 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfbP31240 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfbP31240 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfbP31240 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PdgfbP31240 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PdgfbP31240 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PdgfbP31240 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.93■■□□□ 1.42
PdgfbP31240 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.93■■□□□ 1.42
PdgfbP31240 Gm9812-201ENSMUST00000061934 968 ntBASIC23.93■■□□□ 1.42
PdgfbP31240 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
PdgfbP31240 Gm15546-201ENSMUST00000122095 826 ntBASIC23.92■■□□□ 1.42
PdgfbP31240 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.92■■□□□ 1.42
PdgfbP31240 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
PdgfbP31240 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PdgfbP31240 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.91■■□□□ 1.42
PdgfbP31240 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PdgfbP31240 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.9■■□□□ 1.42
PdgfbP31240 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PdgfbP31240 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PdgfbP31240 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PdgfbP31240 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.89■■□□□ 1.41
PdgfbP31240 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PdgfbP31240 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PdgfbP31240 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
PdgfbP31240 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PdgfbP31240 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PdgfbP31240 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PdgfbP31240 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PdgfbP31240 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PdgfbP31240 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PdgfbP31240 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PdgfbP31240 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.84■■□□□ 1.41
PdgfbP31240 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PdgfbP31240 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
PdgfbP31240 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfbP31240 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfbP31240 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfbP31240 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfbP31240 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
PdgfbP31240 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
PdgfbP31240 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.82■■□□□ 1.4
PdgfbP31240 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfbP31240 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfbP31240 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.82■■□□□ 1.4
PdgfbP31240 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PdgfbP31240 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.81■■□□□ 1.4
PdgfbP31240 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PdgfbP31240 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PdgfbP31240 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PdgfbP31240 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PdgfbP31240 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PdgfbP31240 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.79■■□□□ 1.4
PdgfbP31240 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PdgfbP31240 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PdgfbP31240 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PdgfbP31240 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PdgfbP31240 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.77■■□□□ 1.4
PdgfbP31240 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.77■■□□□ 1.4
PdgfbP31240 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PdgfbP31240 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms