Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.44■■□□□ 1.34
LCN1P31025 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
LCN1P31025 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LCN1P31025 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
LCN1P31025 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
LCN1P31025 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.43■■□□□ 1.34
LCN1P31025 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
LCN1P31025 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.42■■□□□ 1.34
LCN1P31025 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
LCN1P31025 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LCN1P31025 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
LCN1P31025 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.4■■□□□ 1.34
LCN1P31025 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.4■■□□□ 1.34
LCN1P31025 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
LCN1P31025 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
LCN1P31025 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
LCN1P31025 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
LCN1P31025 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.39■■□□□ 1.33
LCN1P31025 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LCN1P31025 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LCN1P31025 ZNRF2P2-203ENST00000454624 420 ntBASIC23.38■■□□□ 1.33
LCN1P31025 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LCN1P31025 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
LCN1P31025 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LCN1P31025 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
LCN1P31025 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LCN1P31025 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.37■■□□□ 1.33
LCN1P31025 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.36■■□□□ 1.33
LCN1P31025 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.36■■□□□ 1.33
LCN1P31025 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LCN1P31025 ABHD17AP4-201ENST00000411545 909 ntBASIC23.36■■□□□ 1.33
LCN1P31025 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LCN1P31025 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LCN1P31025 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LCN1P31025 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LCN1P31025 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.35■■□□□ 1.33
LCN1P31025 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.35■■□□□ 1.33
LCN1P31025 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.34■■□□□ 1.33
LCN1P31025 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.34■■□□□ 1.33
LCN1P31025 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LCN1P31025 AC110285.7-201ENST00000624417 1536 ntBASIC23.33■■□□□ 1.33
LCN1P31025 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LCN1P31025 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LCN1P31025 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.33■■□□□ 1.33
LCN1P31025 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.33■■□□□ 1.33
LCN1P31025 DUX4L13-201ENST00000554103 1267 ntBASIC23.32■■□□□ 1.32
LCN1P31025 DUX4L15-201ENST00000611059 1267 ntBASIC23.32■■□□□ 1.32
LCN1P31025 DUX4L11-201ENST00000611504 1267 ntBASIC23.32■■□□□ 1.32
LCN1P31025 DUX4L12-201ENST00000614593 1267 ntBASIC23.32■■□□□ 1.32
LCN1P31025 DUX4L23-201ENST00000615195 1269 ntBASIC23.32■■□□□ 1.32
LCN1P31025 DUX4L24-201ENST00000617576 1269 ntBASIC23.32■■□□□ 1.32
LCN1P31025 DUX4L22-201ENST00000618238 1269 ntBASIC23.32■■□□□ 1.32
LCN1P31025 DUX4L20-201ENST00000619712 1269 ntBASIC23.32■■□□□ 1.32
LCN1P31025 DUX4L14-201ENST00000621227 1267 ntBASIC23.32■■□□□ 1.32
LCN1P31025 DUX4L21-201ENST00000622058 1269 ntBASIC23.32■■□□□ 1.32
LCN1P31025 DUX4L10-201ENST00000622460 1267 ntBASIC23.32■■□□□ 1.32
LCN1P31025 DUX4L25-201ENST00000624915 1269 ntBASIC23.32■■□□□ 1.32
LCN1P31025 AC018358.1-201ENST00000631079 1402 ntBASIC23.31■■□□□ 1.32
LCN1P31025 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LCN1P31025 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.3■■□□□ 1.32
LCN1P31025 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LCN1P31025 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
LCN1P31025 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LCN1P31025 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
LCN1P31025 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
LCN1P31025 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.29■■□□□ 1.32
LCN1P31025 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LCN1P31025 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
LCN1P31025 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LCN1P31025 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
LCN1P31025 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.28■■□□□ 1.32
LCN1P31025 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LCN1P31025 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LCN1P31025 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
LCN1P31025 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
LCN1P31025 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LCN1P31025 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LCN1P31025 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
LCN1P31025 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LCN1P31025 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LCN1P31025 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
LCN1P31025 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.26■■□□□ 1.31
LCN1P31025 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LCN1P31025 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LCN1P31025 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.26■■□□□ 1.31
LCN1P31025 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
LCN1P31025 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.25■■□□□ 1.31
LCN1P31025 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
LCN1P31025 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LCN1P31025 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.24■■□□□ 1.31
LCN1P31025 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
LCN1P31025 BX255925.1-201ENST00000566954 1854 ntBASIC23.24■■□□□ 1.31
LCN1P31025 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LCN1P31025 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.24■■□□□ 1.31
LCN1P31025 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LCN1P31025 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LCN1P31025 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LCN1P31025 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LCN1P31025 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.23■■□□□ 1.31
LCN1P31025 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms