Protein–RNA interactions for Protein: P29268

Ctgf, Connective tissue growth factor, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtgfP29268 Gm4799-201ENSMUST00000095396 657 ntBASIC21.8■■□□□ 1.08
CtgfP29268 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CtgfP29268 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CtgfP29268 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CtgfP29268 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CtgfP29268 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CtgfP29268 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.78■■□□□ 1.08
CtgfP29268 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CtgfP29268 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CtgfP29268 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.77■■□□□ 1.08
CtgfP29268 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CtgfP29268 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CtgfP29268 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CtgfP29268 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CtgfP29268 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CtgfP29268 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CtgfP29268 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.75■■□□□ 1.07
CtgfP29268 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CtgfP29268 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CtgfP29268 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CtgfP29268 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CtgfP29268 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CtgfP29268 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CtgfP29268 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CtgfP29268 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CtgfP29268 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CtgfP29268 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CtgfP29268 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CtgfP29268 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.72■■□□□ 1.07
CtgfP29268 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CtgfP29268 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CtgfP29268 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CtgfP29268 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.7■■□□□ 1.06
CtgfP29268 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.7■■□□□ 1.06
CtgfP29268 Gm6311-201ENSMUST00000073790 878 ntBASIC21.7■■□□□ 1.06
CtgfP29268 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.7■■□□□ 1.06
CtgfP29268 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CtgfP29268 Mir3960-201ENSMUST00000198213 73 ntBASIC21.69■■□□□ 1.06
CtgfP29268 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
CtgfP29268 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.68■■□□□ 1.06
CtgfP29268 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CtgfP29268 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CtgfP29268 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.67■■□□□ 1.06
CtgfP29268 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.67■■□□□ 1.06
CtgfP29268 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CtgfP29268 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CtgfP29268 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.66■■□□□ 1.06
CtgfP29268 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CtgfP29268 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CtgfP29268 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CtgfP29268 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.65■■□□□ 1.06
CtgfP29268 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.65■■□□□ 1.06
CtgfP29268 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CtgfP29268 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CtgfP29268 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CtgfP29268 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CtgfP29268 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CtgfP29268 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CtgfP29268 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CtgfP29268 Gm45364-201ENSMUST00000210883 159 ntBASIC21.63■■□□□ 1.05
CtgfP29268 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CtgfP29268 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CtgfP29268 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CtgfP29268 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CtgfP29268 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CtgfP29268 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CtgfP29268 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.62■■□□□ 1.05
CtgfP29268 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CtgfP29268 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CtgfP29268 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.62■■□□□ 1.05
CtgfP29268 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CtgfP29268 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CtgfP29268 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.61■■□□□ 1.05
CtgfP29268 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CtgfP29268 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CtgfP29268 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.6■■□□□ 1.05
CtgfP29268 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.6■■□□□ 1.05
CtgfP29268 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CtgfP29268 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CtgfP29268 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CtgfP29268 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CtgfP29268 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CtgfP29268 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CtgfP29268 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.58■■□□□ 1.05
CtgfP29268 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CtgfP29268 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CtgfP29268 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CtgfP29268 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.57■■□□□ 1.04
CtgfP29268 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CtgfP29268 Gm9812-201ENSMUST00000061934 968 ntBASIC21.56■■□□□ 1.04
CtgfP29268 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CtgfP29268 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CtgfP29268 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.55■■□□□ 1.04
CtgfP29268 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CtgfP29268 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CtgfP29268 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CtgfP29268 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CtgfP29268 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CtgfP29268 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CtgfP29268 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms