Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 YNL190WYNL190W 615 nt8.2□□□□□ -1.1
MSH2P25847 YFR020WYFR020W 699 nt8.19□□□□□ -1.1
MSH2P25847 DUR3YHL016C 2208 nt8.19□□□□□ -1.1
MSH2P25847 PET18YCR020C 648 nt8.18□□□□□ -1.1
MSH2P25847 YMR166CYMR166C 1107 nt8.18□□□□□ -1.1
MSH2P25847 ORT1YOR130C 879 nt8.18□□□□□ -1.1
MSH2P25847 YJR149WYJR149W 1215 nt8.17□□□□□ -1.1
MSH2P25847 LAS17YOR181W 1902 nt8.17□□□□□ -1.1
MSH2P25847 snR86snR86 1004 nt8.16□□□□□ -1.1
MSH2P25847 TMS1YDR105C 1422 nt8.16□□□□□ -1.1
MSH2P25847 FUS3YBL016W 1062 nt8.16□□□□□ -1.1
MSH2P25847 MFT1YML062C 1179 nt8.16□□□□□ -1.1
MSH2P25847 ELP4YPL101W 1371 nt8.16□□□□□ -1.1
MSH2P25847 SGV1YPR161C 1974 nt8.16□□□□□ -1.1
MSH2P25847 YLR072WYLR072W 2082 nt8.15□□□□□ -1.1
MSH2P25847 LSP1YPL004C 1026 nt8.15□□□□□ -1.1
MSH2P25847 SRM1YGL097W 1449 nt8.14□□□□□ -1.11
MSH2P25847 UTR5YEL035C 501 nt8.14□□□□□ -1.11
MSH2P25847 YER156CYER156C 1017 nt8.14□□□□□ -1.11
MSH2P25847 ADE1YAR015W 921 nt8.14□□□□□ -1.11
MSH2P25847 PZF1YPR186C 1290 nt8.14□□□□□ -1.11
MSH2P25847 SNU71YGR013W 1863 nt8.14□□□□□ -1.11
MSH2P25847 EHD3YDR036C 1503 nt8.13□□□□□ -1.11
MSH2P25847 YIL177CYIL177C 5277 nt8.11□□□□□ -1.11
MSH2P25847 RRT14YIL127C 621 nt8.11□□□□□ -1.11
MSH2P25847 snR4snR4 186 nt8.11□□□□□ -1.11
MSH2P25847 MEP1YGR121C 1479 nt8.11□□□□□ -1.11
MSH2P25847 BUB2YMR055C 921 nt8.1□□□□□ -1.11
MSH2P25847 PET494YNR045W 1470 nt8.1□□□□□ -1.11
MSH2P25847 NPL6YMR091C 1308 nt8.09□□□□□ -1.11
MSH2P25847 YIR035CYIR035C 765 nt8.09□□□□□ -1.11
MSH2P25847 YLR460CYLR460C 1131 nt8.09□□□□□ -1.11
MSH2P25847 ADE16YLR028C 1776 nt8.09□□□□□ -1.11
MSH2P25847 MAM3YOL060C 2121 nt8.08□□□□□ -1.12
MSH2P25847 YJL043WYJL043W 774 nt8.08□□□□□ -1.12
MSH2P25847 ADE5,7YGL234W 2409 nt8.07□□□□□ -1.12
MSH2P25847 LEA1YPL213W 717 nt8.07□□□□□ -1.12
MSH2P25847 GCD11YER025W 1584 nt8.06□□□□□ -1.12
MSH2P25847 PMA2YPL036W 2844 nt8.06□□□□□ -1.12
MSH2P25847 STF1YDL130W-A 261 nt8.06□□□□□ -1.12
MSH2P25847 YBR056WYBR056W 1506 nt8.05□□□□□ -1.12
MSH2P25847 NUP53YMR153W 1428 nt8.04□□□□□ -1.12
MSH2P25847 RPR1RPR1 369 nt8.04□□□□□ -1.12
MSH2P25847 YOR300WYOR300W 309 nt8.04□□□□□ -1.12
MSH2P25847 FRT1YOR324C 1809 nt8.03□□□□□ -1.12
MSH2P25847 CAK1YFL029C 1107 nt8.03□□□□□ -1.12
MSH2P25847 HIS3YOR202W 663 nt8.03□□□□□ -1.12
MSH2P25847 OLA1YBR025C 1185 nt8.03□□□□□ -1.12
MSH2P25847 CIT3YPR001W 1461 nt8.02□□□□□ -1.13
MSH2P25847 CHS7YHR142W 951 nt8.02□□□□□ -1.13
MSH2P25847 TDH1YJL052W 999 nt8.02□□□□□ -1.13
MSH2P25847 COS10YNR075W 1125 nt8.02□□□□□ -1.13
MSH2P25847 ABP1YCR088W 1779 nt8.02□□□□□ -1.13
MSH2P25847 ECM10YEL030W 1935 nt8.01□□□□□ -1.13
MSH2P25847 INO1YJL153C 1602 nt8.01□□□□□ -1.13
MSH2P25847 YCR049CYCR049C 447 nt8.01□□□□□ -1.13
MSH2P25847 AIM34YMR003W 597 nt8□□□□□ -1.13
MSH2P25847 MET22YOL064C 1074 nt8□□□□□ -1.13
MSH2P25847 YPR084WYPR084W 1371 nt7.99□□□□□ -1.13
MSH2P25847 OCH1YGL038C 1443 nt7.99□□□□□ -1.13
MSH2P25847 PFS2YNL317W 1398 nt7.98□□□□□ -1.13
MSH2P25847 COX16YJL003W 357 nt7.98□□□□□ -1.13
MSH2P25847 YRF1-1YDR545W 5391 nt7.98□□□□□ -1.13
MSH2P25847 YRF1-5YLR467W 5391 nt7.98□□□□□ -1.13
MSH2P25847 YRF1-8YOR396W 5391 nt7.98□□□□□ -1.13
MSH2P25847 YRF1-3YGR296W 5580 nt7.97□□□□□ -1.13
MSH2P25847 YRF1-6YNL339C 5580 nt7.97□□□□□ -1.13
MSH2P25847 YRF1-7YPL283C 5580 nt7.97□□□□□ -1.13
MSH2P25847 NDE2YDL085W 1638 nt7.97□□□□□ -1.13
MSH2P25847 RNA170RNA170 169 nt7.97□□□□□ -1.13
MSH2P25847 BXI1YNL305C 894 nt7.97□□□□□ -1.13
MSH2P25847 RPS6AYPL090C 711 nt7.97□□□□□ -1.13
MSH2P25847 RPS6BYBR181C 711 nt7.97□□□□□ -1.13
MSH2P25847 ATP2YJR121W 1536 nt7.97□□□□□ -1.13
MSH2P25847 DIA4YHR011W 1341 nt7.97□□□□□ -1.13
MSH2P25847 GGC1YDL198C 903 nt7.95□□□□□ -1.14
MSH2P25847 ORM1YGR038W 669 nt7.95□□□□□ -1.14
MSH2P25847 INP54YOL065C 1155 nt7.95□□□□□ -1.14
MSH2P25847 HSV2YGR223C 1347 nt7.95□□□□□ -1.14
MSH2P25847 NDE1YMR145C 1683 nt7.95□□□□□ -1.14
MSH2P25847 GUT1YHL032C 2130 nt7.94□□□□□ -1.14
MSH2P25847 BUD31YCR063W 474 nt7.94□□□□□ -1.14
MSH2P25847 YHR145CYHR145C 357 nt7.94□□□□□ -1.14
MSH2P25847 HMT1YBR034C 1047 nt7.94□□□□□ -1.14
MSH2P25847 RHO1YPR165W 630 nt7.94□□□□□ -1.14
MSH2P25847 YHC3YJL059W 1227 nt7.93□□□□□ -1.14
MSH2P25847 YNL140CYNL140C 570 nt7.93□□□□□ -1.14
MSH2P25847 THI73YLR004C 1572 nt7.93□□□□□ -1.14
MSH2P25847 PDC6YGR087C 1692 nt7.92□□□□□ -1.14
MSH2P25847 CDC16YKL022C 2523 nt7.92□□□□□ -1.14
MSH2P25847 YDR476CYDR476C 675 nt7.92□□□□□ -1.14
MSH2P25847 HAL5YJL165C 2568 nt7.92□□□□□ -1.14
MSH2P25847 ITR1YDR497C 1755 nt7.92□□□□□ -1.14
MSH2P25847 TOP3YLR234W 1971 nt7.91□□□□□ -1.14
MSH2P25847 MDH2YOL126C 1134 nt7.91□□□□□ -1.14
MSH2P25847 TIF3YPR163C 1311 nt7.91□□□□□ -1.14
MSH2P25847 EHT1YBR177C 1356 nt7.91□□□□□ -1.14
MSH2P25847 LRO1YNR008W 1986 nt7.91□□□□□ -1.14
MSH2P25847 CTF3YLR381W 2202 nt7.91□□□□□ -1.14
MSH2P25847 TGL5YOR081C 2250 nt7.9□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 20.5 ms