Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.97■■□□□ 1.11
CCL1P22362 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCL1P22362 AC018358.1-201ENST00000631079 1402 ntBASIC21.97■■□□□ 1.11
CCL1P22362 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL1P22362 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCL1P22362 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL1P22362 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL1P22362 AP006261.1-201ENST00000584783 668 ntBASIC21.96■■□□□ 1.11
CCL1P22362 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CCL1P22362 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.96■■□□□ 1.11
CCL1P22362 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.95■■□□□ 1.1
CCL1P22362 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.95■■□□□ 1.1
CCL1P22362 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.95■■□□□ 1.1
CCL1P22362 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCL1P22362 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCL1P22362 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCL1P22362 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCL1P22362 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCL1P22362 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCL1P22362 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCL1P22362 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCL1P22362 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCL1P22362 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCL1P22362 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCL1P22362 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCL1P22362 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.9■■□□□ 1.1
CCL1P22362 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.89■■□□□ 1.1
CCL1P22362 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CCL1P22362 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCL1P22362 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.88■■□□□ 1.09
CCL1P22362 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.88■■□□□ 1.09
CCL1P22362 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.88■■□□□ 1.09
CCL1P22362 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCL1P22362 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCL1P22362 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.87■■□□□ 1.09
CCL1P22362 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCL1P22362 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CCL1P22362 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCL1P22362 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.86■■□□□ 1.09
CCL1P22362 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CCL1P22362 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCL1P22362 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCL1P22362 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.86■■□□□ 1.09
CCL1P22362 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCL1P22362 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.86■■□□□ 1.09
CCL1P22362 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.86■■□□□ 1.09
CCL1P22362 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCL1P22362 AC087741.3-201ENST00000624270 1347 ntBASIC21.85■■□□□ 1.09
CCL1P22362 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCL1P22362 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCL1P22362 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCL1P22362 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCL1P22362 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCL1P22362 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.84■■□□□ 1.09
CCL1P22362 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CCL1P22362 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCL1P22362 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCL1P22362 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCL1P22362 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.83■■□□□ 1.08
CCL1P22362 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.83■■□□□ 1.08
CCL1P22362 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.83■■□□□ 1.08
CCL1P22362 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.82■■□□□ 1.08
CCL1P22362 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCL1P22362 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCL1P22362 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCL1P22362 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.81■■□□□ 1.08
CCL1P22362 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCL1P22362 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.8■■□□□ 1.08
CCL1P22362 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCL1P22362 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCL1P22362 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL1P22362 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL1P22362 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL1P22362 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.79■■□□□ 1.08
CCL1P22362 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.79■■□□□ 1.08
CCL1P22362 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL1P22362 AL162393.1-201ENST00000437852 946 ntBASIC21.79■■□□□ 1.08
CCL1P22362 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCL1P22362 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCL1P22362 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL1P22362 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL1P22362 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCL1P22362 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.78■■□□□ 1.08
CCL1P22362 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCL1P22362 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.77■■□□□ 1.08
CCL1P22362 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.76■■□□□ 1.07
CCL1P22362 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCL1P22362 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCL1P22362 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.76■■□□□ 1.07
CCL1P22362 AC044849.2-201ENST00000606596 710 ntBASIC21.76■■□□□ 1.07
CCL1P22362 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms