Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TNFRSF1AP19438 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.56■■□□□ 1.04
TNFRSF1AP19438 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFRSF1AP19438 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TNFRSF1AP19438 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.55■■□□□ 1.04
TNFRSF1AP19438 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.55■■□□□ 1.04
TNFRSF1AP19438 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.55■■□□□ 1.04
TNFRSF1AP19438 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.55■■□□□ 1.04
TNFRSF1AP19438 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF1AP19438 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF1AP19438 AC008813.1-201ENST00000536597 885 ntBASIC21.54■■□□□ 1.04
TNFRSF1AP19438 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF1AP19438 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TNFRSF1AP19438 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TNFRSF1AP19438 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF1AP19438 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF1AP19438 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF1AP19438 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF1AP19438 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF1AP19438 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF1AP19438 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF1AP19438 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNFRSF1AP19438 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNFRSF1AP19438 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.5■■□□□ 1.03
TNFRSF1AP19438 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.5■■□□□ 1.03
TNFRSF1AP19438 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TNFRSF1AP19438 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TNFRSF1AP19438 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNFRSF1AP19438 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNFRSF1AP19438 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.49■■□□□ 1.03
TNFRSF1AP19438 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.48■■□□□ 1.03
TNFRSF1AP19438 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TNFRSF1AP19438 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TNFRSF1AP19438 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.48■■□□□ 1.03
TNFRSF1AP19438 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNFRSF1AP19438 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNFRSF1AP19438 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TNFRSF1AP19438 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNFRSF1AP19438 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNFRSF1AP19438 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNFRSF1AP19438 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNFRSF1AP19438 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.46■■□□□ 1.03
TNFRSF1AP19438 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
TNFRSF1AP19438 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.45■■□□□ 1.03
TNFRSF1AP19438 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TNFRSF1AP19438 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFRSF1AP19438 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFRSF1AP19438 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TNFRSF1AP19438 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TNFRSF1AP19438 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFRSF1AP19438 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.45■■□□□ 1.02
TNFRSF1AP19438 MIR4449-201ENST00000578365 66 ntBASIC21.45■■□□□ 1.02
TNFRSF1AP19438 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TNFRSF1AP19438 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFRSF1AP19438 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFRSF1AP19438 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TNFRSF1AP19438 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.44■■□□□ 1.02
TNFRSF1AP19438 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.44■■□□□ 1.02
TNFRSF1AP19438 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFRSF1AP19438 AC139426.1-201ENST00000568218 2529 ntBASIC21.43■■□□□ 1.02
TNFRSF1AP19438 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TNFRSF1AP19438 AP002414.2-202ENST00000590929 1450 ntBASIC21.43■■□□□ 1.02
TNFRSF1AP19438 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFRSF1AP19438 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFRSF1AP19438 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TNFRSF1AP19438 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TNFRSF1AP19438 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFRSF1AP19438 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TNFRSF1AP19438 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TNFRSF1AP19438 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.42■■□□□ 1.02
TNFRSF1AP19438 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFRSF1AP19438 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TNFRSF1AP19438 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF1AP19438 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TNFRSF1AP19438 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
TNFRSF1AP19438 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.4■■□□□ 1.02
TNFRSF1AP19438 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TNFRSF1AP19438 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.39■■□□□ 1.02
TNFRSF1AP19438 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFRSF1AP19438 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFRSF1AP19438 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFRSF1AP19438 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TNFRSF1AP19438 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFRSF1AP19438 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFRSF1AP19438 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.38■■□□□ 1.01
TNFRSF1AP19438 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TNFRSF1AP19438 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TNFRSF1AP19438 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TNFRSF1AP19438 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
TNFRSF1AP19438 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TNFRSF1AP19438 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF1AP19438 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF1AP19438 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF1AP19438 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF1AP19438 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF1AP19438 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF1AP19438 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF1AP19438 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF1AP19438 AC148477.6-201ENST00000623746 465 ntBASIC21.36■■□□□ 1.01
TNFRSF1AP19438 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms