Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DEFA4P12838 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DEFA4P12838 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DEFA4P12838 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DEFA4P12838 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.36■□□□□ 0.85
DEFA4P12838 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DEFA4P12838 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DEFA4P12838 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
DEFA4P12838 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.36■□□□□ 0.85
DEFA4P12838 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DEFA4P12838 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
DEFA4P12838 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DEFA4P12838 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DEFA4P12838 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
DEFA4P12838 AC108673.1-201ENST00000510422 1159 ntBASIC20.35■□□□□ 0.85
DEFA4P12838 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.35■□□□□ 0.85
DEFA4P12838 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DEFA4P12838 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DEFA4P12838 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEFA4P12838 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.34■□□□□ 0.85
DEFA4P12838 AP004833.2-201ENST00000532228 1454 ntBASIC20.34■□□□□ 0.85
DEFA4P12838 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.34■□□□□ 0.85
DEFA4P12838 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DEFA4P12838 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DEFA4P12838 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
DEFA4P12838 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
DEFA4P12838 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.33■□□□□ 0.85
DEFA4P12838 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.33■□□□□ 0.85
DEFA4P12838 AP006261.1-201ENST00000584783 668 ntBASIC20.33■□□□□ 0.85
DEFA4P12838 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.33■□□□□ 0.85
DEFA4P12838 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
DEFA4P12838 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
DEFA4P12838 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
DEFA4P12838 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.33■□□□□ 0.84
DEFA4P12838 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.33■□□□□ 0.84
DEFA4P12838 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEFA4P12838 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.32■□□□□ 0.84
DEFA4P12838 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
DEFA4P12838 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEFA4P12838 DUX4L28-201ENST00000623687 678 ntBASIC20.32■□□□□ 0.84
DEFA4P12838 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEFA4P12838 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DEFA4P12838 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DEFA4P12838 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
DEFA4P12838 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.31■□□□□ 0.84
DEFA4P12838 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DEFA4P12838 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DEFA4P12838 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEFA4P12838 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEFA4P12838 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DEFA4P12838 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.29■□□□□ 0.84
DEFA4P12838 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DEFA4P12838 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DEFA4P12838 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DEFA4P12838 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.29■□□□□ 0.84
DEFA4P12838 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
DEFA4P12838 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DEFA4P12838 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.28■□□□□ 0.84
DEFA4P12838 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEFA4P12838 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.27■□□□□ 0.84
DEFA4P12838 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEFA4P12838 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.27■□□□□ 0.84
DEFA4P12838 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DEFA4P12838 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
DEFA4P12838 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.26■□□□□ 0.83
DEFA4P12838 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DEFA4P12838 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
DEFA4P12838 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
DEFA4P12838 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DEFA4P12838 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DEFA4P12838 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DEFA4P12838 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DEFA4P12838 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DEFA4P12838 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DEFA4P12838 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DEFA4P12838 BX255925.1-201ENST00000566954 1854 ntBASIC20.24■□□□□ 0.83
DEFA4P12838 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DEFA4P12838 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA4P12838 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.23■□□□□ 0.83
DEFA4P12838 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DEFA4P12838 MIR6090-201ENST00000622481 60 ntBASIC20.22■□□□□ 0.83
DEFA4P12838 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
DEFA4P12838 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DEFA4P12838 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DEFA4P12838 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DEFA4P12838 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
DEFA4P12838 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DEFA4P12838 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DEFA4P12838 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.21■□□□□ 0.83
DEFA4P12838 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
DEFA4P12838 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DEFA4P12838 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.2■□□□□ 0.82
DEFA4P12838 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.2■□□□□ 0.82
DEFA4P12838 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.2■□□□□ 0.82
DEFA4P12838 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.2■□□□□ 0.82
DEFA4P12838 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DEFA4P12838 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.2■□□□□ 0.82
DEFA4P12838 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.2■□□□□ 0.82
DEFA4P12838 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.2■□□□□ 0.82
DEFA4P12838 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms