Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 WHAMMP2-203ENST00000563942 1603 ntBASIC26.65■■□□□ 1.86
RARAP10276 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.65■■□□□ 1.86
RARAP10276 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RARAP10276 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
RARAP10276 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RARAP10276 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RARAP10276 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RARAP10276 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RARAP10276 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
RARAP10276 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
RARAP10276 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
RARAP10276 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
RARAP10276 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
RARAP10276 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.63■■□□□ 1.85
RARAP10276 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.62■■□□□ 1.85
RARAP10276 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RARAP10276 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RARAP10276 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RARAP10276 RPS2P35-201ENST00000443417 897 ntBASIC26.62■■□□□ 1.85
RARAP10276 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.62■■□□□ 1.85
RARAP10276 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RARAP10276 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RARAP10276 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RARAP10276 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RARAP10276 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.61■■□□□ 1.85
RARAP10276 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RARAP10276 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RARAP10276 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.61■■□□□ 1.85
RARAP10276 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.6■■□□□ 1.85
RARAP10276 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.6■■□□□ 1.85
RARAP10276 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RARAP10276 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.6■■□□□ 1.85
RARAP10276 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RARAP10276 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
RARAP10276 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RARAP10276 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
RARAP10276 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.58■■□□□ 1.85
RARAP10276 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.58■■□□□ 1.85
RARAP10276 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.58■■□□□ 1.85
RARAP10276 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
RARAP10276 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RARAP10276 LINC01003-201ENST00000564834 1764 ntBASIC26.57■■□□□ 1.84
RARAP10276 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.56■■□□□ 1.84
RARAP10276 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RARAP10276 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RARAP10276 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.55■■□□□ 1.84
RARAP10276 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RARAP10276 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
RARAP10276 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
RARAP10276 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.54■■□□□ 1.84
RARAP10276 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.53■■□□□ 1.84
RARAP10276 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RARAP10276 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
RARAP10276 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RARAP10276 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RARAP10276 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.52■■□□□ 1.84
RARAP10276 AC021231.2-201ENST00000594613 730 ntBASIC26.52■■□□□ 1.84
RARAP10276 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
RARAP10276 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.51■■□□□ 1.83
RARAP10276 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
RARAP10276 AP002414.2-202ENST00000590929 1450 ntBASIC26.5■■□□□ 1.83
RARAP10276 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.5■■□□□ 1.83
RARAP10276 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RARAP10276 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RARAP10276 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RARAP10276 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RARAP10276 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RARAP10276 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.48■■□□□ 1.83
RARAP10276 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.48■■□□□ 1.83
RARAP10276 DUX4L29-201ENST00000425409 679 ntBASIC26.48■■□□□ 1.83
RARAP10276 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RARAP10276 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.48■■□□□ 1.83
RARAP10276 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.48■■□□□ 1.83
RARAP10276 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RARAP10276 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RARAP10276 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.48■■□□□ 1.83
RARAP10276 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.48■■□□□ 1.83
RARAP10276 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.47■■□□□ 1.83
RARAP10276 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RARAP10276 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RARAP10276 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RARAP10276 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RARAP10276 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RARAP10276 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RARAP10276 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
RARAP10276 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RARAP10276 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RARAP10276 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
RARAP10276 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RARAP10276 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RARAP10276 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
RARAP10276 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.44■■□□□ 1.82
RARAP10276 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RARAP10276 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RARAP10276 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RARAP10276 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RARAP10276 AC135731.1-201ENST00000569415 2548 ntBASIC26.41■■□□□ 1.82
RARAP10276 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RARAP10276 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
RARAP10276 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms