Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 YKR104WYKR104W 921 nt7.36□□□□□ -1.23
TY1A-LR2P0CX72 CTR3YLR411W 726 nt7.36□□□□□ -1.23
TY1A-LR2P0CX72 RSF1YMR030W 1131 nt7.36□□□□□ -1.23
TY1A-LR2P0CX72 TIP1YBR067C 633 nt7.36□□□□□ -1.23
TY1A-LR2P0CX72 GLE1YDL207W 1617 nt7.36□□□□□ -1.23
TY1A-LR2P0CX72 OAC1YKL120W 975 nt7.35□□□□□ -1.23
TY1A-LR2P0CX72 RTG1YOL067C 534 nt7.35□□□□□ -1.23
TY1A-LR2P0CX72 ARO9YHR137W 1542 nt7.35□□□□□ -1.23
TY1A-LR2P0CX72 MSC1YML128C 1542 nt7.35□□□□□ -1.23
TY1A-LR2P0CX72 OSH7YHR001W 1314 nt7.34□□□□□ -1.23
TY1A-LR2P0CX72 ATP6Q0085 780 nt7.34□□□□□ -1.23
TY1A-LR2P0CX72 YGR283CYGR283C 1026 nt7.34□□□□□ -1.23
TY1A-LR2P0CX72 JJJ3YJR097W 519 nt7.34□□□□□ -1.23
TY1A-LR2P0CX72 PCL9YDL179W 915 nt7.33□□□□□ -1.24
TY1A-LR2P0CX72 RRP17YDR412W 708 nt7.33□□□□□ -1.24
TY1A-LR2P0CX72 GTT3YEL017W 1014 nt7.33□□□□□ -1.24
TY1A-LR2P0CX72 FSH1YHR049W 732 nt7.33□□□□□ -1.24
TY1A-LR2P0CX72 ATP12YJL180C 978 nt7.33□□□□□ -1.24
TY1A-LR2P0CX72 SNF7YLR025W 723 nt7.33□□□□□ -1.24
TY1A-LR2P0CX72 ARC35YNR035C 1029 nt7.33□□□□□ -1.24
TY1A-LR2P0CX72 YOL038C-AYOL038C-A 96 nt7.33□□□□□ -1.24
TY1A-LR2P0CX72 YOL107WYOL107W 1029 nt7.33□□□□□ -1.24
TY1A-LR2P0CX72 SOL2YCR073W-A 948 nt7.32□□□□□ -1.24
TY1A-LR2P0CX72 YIR043CYIR043C 693 nt7.32□□□□□ -1.24
TY1A-LR2P0CX72 AIM34YMR003W 597 nt7.32□□□□□ -1.24
TY1A-LR2P0CX72 RNH1YMR234W 1047 nt7.32□□□□□ -1.24
TY1A-LR2P0CX72 YLR072WYLR072W 2082 nt7.32□□□□□ -1.24
TY1A-LR2P0CX72 HSV2YGR223C 1347 nt7.31□□□□□ -1.24
TY1A-LR2P0CX72 BUD9YGR041W 1644 nt7.31□□□□□ -1.24
TY1A-LR2P0CX72 HAT2YEL056W 1206 nt7.31□□□□□ -1.24
TY1A-LR2P0CX72 POT1YIL160C 1254 nt7.31□□□□□ -1.24
TY1A-LR2P0CX72 YMR075C-AYMR075C-A 366 nt7.31□□□□□ -1.24
TY1A-LR2P0CX72 YNL303WYNL303W 348 nt7.31□□□□□ -1.24
TY1A-LR2P0CX72 STE4YOR212W 1272 nt7.31□□□□□ -1.24
TY1A-LR2P0CX72 SAC7YDR389W 1965 nt7.31□□□□□ -1.24
TY1A-LR2P0CX72 HXT12YIL170W 1374 nt7.31□□□□□ -1.24
TY1A-LR2P0CX72 MPC54YOR177C 1395 nt7.31□□□□□ -1.24
TY1A-LR2P0CX72 RPN5YDL147W 1338 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 SPO77YLR341W 1434 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 YDL241WYDL241W 372 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 YDR467CYDR467C 327 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 EMC3YKL207W 762 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 ASP3-1YLR155C 1089 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 ASP3-2YLR157C 1089 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 ASP3-3YLR158C 1089 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 ASP3-4YLR160C 1089 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 COQ2YNR041C 1119 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 YOR300WYOR300W 309 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 ADE5,7YGL234W 2409 nt7.3□□□□□ -1.24
TY1A-LR2P0CX72 FRA1YLL029W 2250 nt7.29□□□□□ -1.24
TY1A-LR2P0CX72 PAU7YAR020C 168 nt7.29□□□□□ -1.24
TY1A-LR2P0CX72 GPN2YOR262W 1044 nt7.29□□□□□ -1.24
TY1A-LR2P0CX72 RAD17YOR368W 1206 nt7.29□□□□□ -1.24
TY1A-LR2P0CX72 PRM4YPL156C 855 nt7.29□□□□□ -1.24
TY1A-LR2P0CX72 snR189snR189 189 nt7.29□□□□□ -1.24
TY1A-LR2P0CX72 NMT1YLR195C 1368 nt7.29□□□□□ -1.24
TY1A-LR2P0CX72 FRT1YOR324C 1809 nt7.29□□□□□ -1.24
TY1A-LR2P0CX72 IPI3YNL182C 1668 nt7.28□□□□□ -1.24
TY1A-LR2P0CX72 DIN7YDR263C 1293 nt7.28□□□□□ -1.24
TY1A-LR2P0CX72 MCM21YDR318W 1107 nt7.28□□□□□ -1.24
TY1A-LR2P0CX72 SHO1YER118C 1104 nt7.28□□□□□ -1.24
TY1A-LR2P0CX72 YGR011WYGR011W 327 nt7.28□□□□□ -1.24
TY1A-LR2P0CX72 GTO1YGR154C 1071 nt7.28□□□□□ -1.24
TY1A-LR2P0CX72 RFA2YNL312W 822 nt7.28□□□□□ -1.24
TY1A-LR2P0CX72 TIP41YPR040W 1071 nt7.28□□□□□ -1.24
TY1A-LR2P0CX72 YHL044WYHL044W 708 nt7.27□□□□□ -1.25
TY1A-LR2P0CX72 YHC3YJL059W 1227 nt7.27□□□□□ -1.25
TY1A-LR2P0CX72 ITR1YDR497C 1755 nt7.27□□□□□ -1.25
TY1A-LR2P0CX72 MGR3YMR115W 1506 nt7.27□□□□□ -1.25
TY1A-LR2P0CX72 GND1YHR183W 1470 nt7.26□□□□□ -1.25
TY1A-LR2P0CX72 YDR161WYDR161W 1164 nt7.26□□□□□ -1.25
TY1A-LR2P0CX72 BUD16YEL029C 939 nt7.26□□□□□ -1.25
TY1A-LR2P0CX72 LOT5YKL183W 921 nt7.26□□□□□ -1.25
TY1A-LR2P0CX72 YLR285C-AYLR285C-A 171 nt7.26□□□□□ -1.25
TY1A-LR2P0CX72 ERV41YML067C 1059 nt7.26□□□□□ -1.25
TY1A-LR2P0CX72 NAT4YMR069W 858 nt7.26□□□□□ -1.25
TY1A-LR2P0CX72 OSW1YOR255W 837 nt7.26□□□□□ -1.25
TY1A-LR2P0CX72 FIT3YOR383C 615 nt7.26□□□□□ -1.25
TY1A-LR2P0CX72 PHO89YBR296C 1725 nt7.26□□□□□ -1.25
TY1A-LR2P0CX72 AFG2YLR397C 2343 nt7.26□□□□□ -1.25
TY1A-LR2P0CX72 OKP1YGR179C 1221 nt7.25□□□□□ -1.25
TY1A-LR2P0CX72 MDH2YOL126C 1134 nt7.25□□□□□ -1.25
TY1A-LR2P0CX72 RER1YCL001W 567 nt7.25□□□□□ -1.25
TY1A-LR2P0CX72 PMT7YDR307W 1989 nt7.25□□□□□ -1.25
TY1A-LR2P0CX72 PRC1YMR297W 1599 nt7.25□□□□□ -1.25
TY1A-LR2P0CX72 SAL1YNL083W 1485 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 TOP3YLR234W 1971 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 AAT1YKL106W 1356 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 MST1YKL194C 1389 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 YEL050W-AYEL050W-A 192 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 XPT1YJR133W 630 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 SPC42YKL042W 1092 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 YGP1YNL160W 1065 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 PFA4YOL003C 1137 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 TFB4YPR056W 1017 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 YBR226CYBR226C 411 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 DIA4YHR011W 1341 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 PAF1YBR279W 1338 nt7.24□□□□□ -1.25
TY1A-LR2P0CX72 CHA1YCL064C 1083 nt7.23□□□□□ -1.25
TY1A-LR2P0CX72 YER138W-AYER138W-A 105 nt7.23□□□□□ -1.25
Retrieved 100 of 7,029 protein–RNA pairs in 31.2 ms