Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 BIO3YNR058W 1443 nt7.36□□□□□ -1.23
RPL40BP0CH09 GAS1YMR307W 1680 nt7.36□□□□□ -1.23
RPL40BP0CH09 THI6YPL214C 1623 nt7.36□□□□□ -1.23
RPL40BP0CH09 GTB1YDR221W 2109 nt7.36□□□□□ -1.23
RPL40BP0CH09 RPN14YGL004C 1254 nt7.35□□□□□ -1.23
RPL40BP0CH09 HAP5YOR358W 729 nt7.35□□□□□ -1.23
RPL40BP0CH09 snR4snR4 186 nt7.35□□□□□ -1.23
RPL40BP0CH09 CYS4YGR155W 1524 nt7.35□□□□□ -1.23
RPL40BP0CH09 DUS3YLR401C 2007 nt7.35□□□□□ -1.23
RPL40BP0CH09 FYV1YDR024W 486 nt7.33□□□□□ -1.24
RPL40BP0CH09 SUV3YPL029W 2214 nt7.33□□□□□ -1.24
RPL40BP0CH09 PMU1YKL128C 888 nt7.32□□□□□ -1.24
RPL40BP0CH09 CRC1YOR100C 984 nt7.32□□□□□ -1.24
RPL40BP0CH09 ADE16YLR028C 1776 nt7.31□□□□□ -1.24
RPL40BP0CH09 TIF3YPR163C 1311 nt7.3□□□□□ -1.24
RPL40BP0CH09 YPL067CYPL067C 597 nt7.3□□□□□ -1.24
RPL40BP0CH09 LPD1YFL018C 1500 nt7.3□□□□□ -1.24
RPL40BP0CH09 YIL177CYIL177C 5277 nt7.3□□□□□ -1.24
RPL40BP0CH09 CKI1YLR133W 1749 nt7.3□□□□□ -1.24
RPL40BP0CH09 YER152CYER152C 1332 nt7.29□□□□□ -1.24
RPL40BP0CH09 SRM1YGL097W 1449 nt7.29□□□□□ -1.24
RPL40BP0CH09 TRR2YHR106W 1029 nt7.29□□□□□ -1.24
RPL40BP0CH09 GPM1YKL152C 744 nt7.29□□□□□ -1.24
RPL40BP0CH09 LDB7YBL006C 543 nt7.29□□□□□ -1.24
RPL40BP0CH09 PRS4YBL068W 981 nt7.29□□□□□ -1.24
RPL40BP0CH09 MBF1YOR298C-A 456 nt7.29□□□□□ -1.24
RPL40BP0CH09 RHO1YPR165W 630 nt7.29□□□□□ -1.24
RPL40BP0CH09 RNA170RNA170 169 nt7.28□□□□□ -1.24
RPL40BP0CH09 AAT1YKL106W 1356 nt7.28□□□□□ -1.24
RPL40BP0CH09 DCR2YLR361C 1737 nt7.27□□□□□ -1.25
RPL40BP0CH09 MDH1YKL085W 1005 nt7.27□□□□□ -1.25
RPL40BP0CH09 SCS22YBL091C-A 528 nt7.27□□□□□ -1.25
RPL40BP0CH09 YOR200WYOR200W 399 nt7.27□□□□□ -1.25
RPL40BP0CH09 CRN1YLR429W 1956 nt7.27□□□□□ -1.25
RPL40BP0CH09 YMC2YBR104W 990 nt7.26□□□□□ -1.25
RPL40BP0CH09 ILV2YMR108W 2064 nt7.26□□□□□ -1.25
RPL40BP0CH09 FCY22YER060W-A 1593 nt7.25□□□□□ -1.25
RPL40BP0CH09 DIA4YHR011W 1341 nt7.24□□□□□ -1.25
RPL40BP0CH09 FTH1YBR207W 1398 nt7.23□□□□□ -1.25
RPL40BP0CH09 ERG10YPL028W 1197 nt7.23□□□□□ -1.25
RPL40BP0CH09 JHD1YER051W 1479 nt7.23□□□□□ -1.25
RPL40BP0CH09 GAL2YLR081W 1725 nt7.22□□□□□ -1.25
RPL40BP0CH09 THI73YLR004C 1572 nt7.22□□□□□ -1.25
RPL40BP0CH09 YKL153WYKL153W 510 nt7.22□□□□□ -1.25
RPL40BP0CH09 MSI1YBR195C 1269 nt7.22□□□□□ -1.25
RPL40BP0CH09 PFS2YNL317W 1398 nt7.21□□□□□ -1.25
RPL40BP0CH09 APT1YML022W 564 nt7.21□□□□□ -1.26
RPL40BP0CH09 YRF1-1YDR545W 5391 nt7.2□□□□□ -1.26
RPL40BP0CH09 YRF1-5YLR467W 5391 nt7.2□□□□□ -1.26
RPL40BP0CH09 YRF1-8YOR396W 5391 nt7.2□□□□□ -1.26
RPL40BP0CH09 YLR072WYLR072W 2082 nt7.2□□□□□ -1.26
RPL40BP0CH09 ARO3YDR035W 1113 nt7.2□□□□□ -1.26
RPL40BP0CH09 ADH6YMR318C 1083 nt7.2□□□□□ -1.26
RPL40BP0CH09 YRF1-3YGR296W 5580 nt7.2□□□□□ -1.26
RPL40BP0CH09 YRF1-6YNL339C 5580 nt7.2□□□□□ -1.26
RPL40BP0CH09 YRF1-7YPL283C 5580 nt7.2□□□□□ -1.26
RPL40BP0CH09 MED6YHR058C 888 nt7.19□□□□□ -1.26
RPL40BP0CH09 HSV2YGR223C 1347 nt7.19□□□□□ -1.26
RPL40BP0CH09 TIM50YPL063W 1431 nt7.18□□□□□ -1.26
RPL40BP0CH09 PUP3YER094C 618 nt7.18□□□□□ -1.26
RPL40BP0CH09 SML1YML058W 315 nt7.18□□□□□ -1.26
RPL40BP0CH09 GGA2YHR108W 1758 nt7.18□□□□□ -1.26
RPL40BP0CH09 THI3YDL080C 1830 nt7.17□□□□□ -1.26
RPL40BP0CH09 YML122CYML122C 381 nt7.17□□□□□ -1.26
RPL40BP0CH09 PRE10YOR362C 867 nt7.17□□□□□ -1.26
RPL40BP0CH09 PAB1YER165W 1734 nt7.17□□□□□ -1.26
RPL40BP0CH09 YGL081WYGL081W 963 nt7.16□□□□□ -1.26
RPL40BP0CH09 NMA2YGR010W 1188 nt7.16□□□□□ -1.26
RPL40BP0CH09 MRS4YKR052C 915 nt7.16□□□□□ -1.26
RPL40BP0CH09 MET30YIL046W 1923 nt7.16□□□□□ -1.26
RPL40BP0CH09 YJR142WYJR142W 1029 nt7.15□□□□□ -1.26
RPL40BP0CH09 MDH2YOL126C 1134 nt7.15□□□□□ -1.26
RPL40BP0CH09 SHC1YER096W 1539 nt7.14□□□□□ -1.27
RPL40BP0CH09 YNL190WYNL190W 615 nt7.14□□□□□ -1.27
RPL40BP0CH09 LEA1YPL213W 717 nt7.14□□□□□ -1.27
RPL40BP0CH09 TPN1YGL186C 1740 nt7.13□□□□□ -1.27
RPL40BP0CH09 MEP1YGR121C 1479 nt7.13□□□□□ -1.27
RPL40BP0CH09 YIR035CYIR035C 765 nt7.13□□□□□ -1.27
RPL40BP0CH09 YMR316C-BYMR316C-B 309 nt7.13□□□□□ -1.27
RPL40BP0CH09 YIP4YGL198W 708 nt7.12□□□□□ -1.27
RPL40BP0CH09 GPD1YDL022W 1176 nt7.11□□□□□ -1.27
RPL40BP0CH09 snR86snR86 1004 nt7.11□□□□□ -1.27
RPL40BP0CH09 STS1YIR011C 960 nt7.11□□□□□ -1.27
RPL40BP0CH09 DRE2YKR071C 1047 nt7.11□□□□□ -1.27
RPL40BP0CH09 CDC3YLR314C 1563 nt7.11□□□□□ -1.27
RPL40BP0CH09 ERV2YPR037C 591 nt7.1□□□□□ -1.27
RPL40BP0CH09 CIA1YDR267C 993 nt7.09□□□□□ -1.27
RPL40BP0CH09 SPT3YDR392W 1014 nt7.09□□□□□ -1.27
RPL40BP0CH09 LIA1YJR070C 978 nt7.09□□□□□ -1.27
RPL40BP0CH09 DTR1YBR180W 1719 nt7.08□□□□□ -1.28
RPL40BP0CH09 GLY1YEL046C 1164 nt7.08□□□□□ -1.28
RPL40BP0CH09 SKG1YKR100C 1068 nt7.08□□□□□ -1.28
RPL40BP0CH09 AIM34YMR003W 597 nt7.08□□□□□ -1.28
RPL40BP0CH09 AGX1YFL030W 1158 nt7.07□□□□□ -1.28
RPL40BP0CH09 HOC1YJR075W 1191 nt7.07□□□□□ -1.28
RPL40BP0CH09 FPR3YML074C 1236 nt7.07□□□□□ -1.28
RPL40BP0CH09 AAC3YBR085W 924 nt7.07□□□□□ -1.28
RPL40BP0CH09 LAS17YOR181W 1902 nt7.07□□□□□ -1.28
RPL40BP0CH09 PMT7YDR307W 1989 nt7.06□□□□□ -1.28
RPL40BP0CH09 ABP1YCR088W 1779 nt7.06□□□□□ -1.28
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms